Fitness for 5 genes in Pseudomonas fluorescens FW300-N1B4

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 191 experiments or choose conditions or try the comparative fitness browser

500 ntPf1N1B4_4963 and Pf1N1B4_4964 are separated by 22 nucleotidesPf1N1B4_4964 and Pf1N1B4_4965 are separated by 24 nucleotidesPf1N1B4_4965 and Pf1N1B4_4966 are separated by 280 nucleotidesPf1N1B4_4966 and Pf1N1B4_4967 are separated by 229 nucleotides Pf1N1B4_4963 - Tricarboxylate transport protein TctC, at 5,504,289 to 5,505,254 _4963 Pf1N1B4_4964 - Tricarboxylate transport protein TctB, at 5,505,277 to 5,505,747 _4964 Pf1N1B4_4965 - Tricarboxylate transport membrane protein TctA, at 5,505,772 to 5,507,280 _4965 Pf1N1B4_4966 - Transcriptional regulator, LysR family, at 5,507,561 to 5,508,454 _4966 Pf1N1B4_4967 - Transcriptional regulator, at 5,508,684 to 5,509,088 _4967
Group Condition Pf1N1B4_4963 Pf1N1B4_4964 Pf1N1B4_4965 Pf1N1B4_4966 Pf1N1B4_4967
carbon source carbon source Sucrose 0.5mM -0.4 -0.5 -0.3 -1.1 N.D.
carbon source L-Glutamic (C) -0.2 -0.5 -0.5 -0.2 N.D.
nitrogen source Uridine (N) +0.3 -1.2 -0.1 -0.4 N.D.
lb LB -0.2 -0.9 -0.2 -0.1 N.D.
nitrogen source L-Methionine (N) -0.5 -0.1 -0.1 -0.6 N.D.
nitrogen source D-Glucosamine Hydrochloride (N) -0.3 -0.5 -0.3 +0.1 N.D.
stress benzoic 0.58 mg/ml +0.2 -0.6 -0.1 -0.4 N.D.
temperature LB 37C -0.2 -0.4 -0.6 +0.3 N.D.
carbon source carbon source Sucrose 1mM -0.0 -0.2 -0.8 +0.4 N.D.
temperature LB 10C -0.2 -0.6 -0.1 +0.3 N.D.
stress Chlorite 1 mM -0.1 +0.5 -0.2 -0.7 N.D.
nitrogen source Thymine (N) +0.4 -0.9 +0.2 +0.1 N.D.
stress Doxycycline hyclate 0.0001 mg/ml +0.1 +0.4 -0.3 -0.4 N.D.
denitrifying Nitrate reduction, replicate C t3 -0.4 -0.2 +0.2 +0.4 N.D.
carbon source carbon source Sucrose 5mM -0.2 +0.0 +0.6 -0.4 N.D.
carbon source D-Gluconic Acid (C) +0.3 +0.2 -0.4 +0.2 N.D.
anaerobic Nitrate reduction +0.3 -0.3 +0.5 -0.2 N.D.
nitrogen source Ammonium chloride (N) +0.6 -0.7 +0.2 +0.3 N.D.
stress Choline chloride 200 mM -0.2 +0.3 -0.4 +0.8 N.D.
anaerobic Nitrate reduction +0.6 +0.3 +0.4 -0.7 N.D.
stress Cephalothin 2.5 mg/ml -0.1 +0.4 +0.5 -0.1 N.D.
denitrifying Denitrifying in presence of WT Pseudomonas N2-E3; replicate C; timepoint 1 +0.0 -0.2 +0.7 +0.3 N.D.
nitrogen source Cytidine (N) +0.6 -0.2 +0.3 +0.2 N.D.
stress Benzethonium chloride 0.0125 mM +0.1 +0.9 -0.3 +0.2 N.D.
carbon source carbon source Sucrose 0.25mM -0.0 +0.6 -0.2 +0.6 N.D.
carbon source Fumarate (C) +0.3 +0.5 -0.4 +0.6 N.D.
carbon source carbon source Sucrose 0.25mM -0.1 +0.0 +0.5 +0.6 N.D.
carbon source L-Lactate (C) +0.4 +0.4 +0.2 +0.3 N.D.
nitrogen source Cytosine (N) +0.6 -0.0 +0.5 +0.2 N.D.
denitrifying Nitrate reduction, replicate A -0.0 +0.2 +0.8 +0.3 N.D.
remove
Pf1N1B4_4963
plot		 remove
Pf1N1B4_4964
plot		 remove
Pf1N1B4_4965		 remove
Pf1N1B4_4966
plot		 remove
Pf1N1B4_4967
plot