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Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens FW300-N1B4
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Pf1N1B4_4870 and Pf1N1B4_4871 are separated by 109 nucleotides
Pf1N1B4_4871 and Pf1N1B4_4872 are separated by 80 nucleotides
Pf1N1B4_4872 and Pf1N1B4_4873 are separated by 37 nucleotides
Pf1N1B4_4873 and Pf1N1B4_4874 are separated by 258 nucleotides
Pf1N1B4_4870 - Isoquinoline 1-oxidoreductase alpha subunit (EC 1.3.99.16), at 5,391,058 to 5,391,531
_4870
Pf1N1B4_4871 - Aldo-keto reductase, at 5,391,641 to 5,391,895
_4871
Pf1N1B4_4872 - Short-chain dehydrogenase/reductase SDR, at 5,391,976 to 5,392,818
_4872
Pf1N1B4_4873 - clavaldehyde dehydrogenase, at 5,392,856 to 5,393,617
_4873
Pf1N1B4_4874 - hypothetical protein, at 5,393,876 to 5,394,127
_4874
Group
Condition
Pf1N1B4
_4870
Pf1N1B4
_4871
Pf1N1B4
_4872
Pf1N1B4
_4873
Pf1N1B4
_4874
carbon source
octanoate (C)
-1.9
N.D.
-1.5
+0.4
+0.3
stress
nitrate 100 mM
-0.8
N.D.
-0.4
-0.9
-0.2
carbon source
carbon source Sucrose 1mM
-2.6
N.D.
-0.0
+0.3
+0.1
carbon source
L-Histidine (C)
-0.8
N.D.
-1.0
-0.2
+0.4
carbon source
butyrate (C)
-2.2
N.D.
+0.2
+0.1
+0.4
nitrogen source
Uridine (N)
-2.0
N.D.
-0.2
-0.3
+0.9
carbon source
carbon source Sucrose 5mM
-1.5
N.D.
-0.3
+0.4
+0.0
phagefrs
Time6-FRS
-0.6
N.D.
+0.8
-0.6
-1.1
carbon source
D-Trehalose (C)
-1.9
N.D.
+0.1
+0.2
+0.4
stress
Choline Lysine 6 mM
+0.8
N.D.
+0.2
-1.0
-0.8
nophagecontrol
Time16-nophage
-1.1
N.D.
+0.9
-0.1
-0.5
nitrogen source
L-Leucine (N)
-1.6
N.D.
+0.4
+0.6
-0.3
carbon source
L-Citrulline (C)
-1.4
N.D.
+0.6
+0.2
+0.6
carbon source
Tween 20 (C)
-1.2
N.D.
+0.5
+0.5
+0.7
nitrogen source
Putrescine (N)
-0.8
N.D.
+0.1
+0.3
+1.2
nitrogen source
L-Methionine (N)
-1.0
N.D.
+1.1
+0.4
+0.3
nitrogen source
L-Valine (N)
-0.5
N.D.
-0.2
+0.4
+1.2
carbon source
L-Leucine (C)
-1.0
N.D.
+0.5
+0.5
+0.9
nitrogen source
L-Citrulline (N)
-0.8
N.D.
+0.5
+0.4
+0.8
stress
Fusidic 0.125 mg/ml
-0.9
N.D.
+0.4
+0.4
+1.0
anaerobic
Nitrate reduction
-0.1
N.D.
-0.7
+0.6
+1.1
carbon source
casaminos (C)
-0.6
N.D.
+0.7
+0.4
+0.6
carbon source
Putrescine (C)
-0.9
N.D.
+0.5
+0.4
+1.2
carbon source
carbon source Sucrose 1mM
+0.4
N.D.
+1.1
+0.3
-0.6
nitrogen source
Carnitine Hydrochloride (N)
-0.6
N.D.
+0.5
+0.7
+0.6
carbon source
Carnitine Hydrochloride (C)
-1.1
N.D.
+0.9
+0.6
+0.8
carbon source
Uridine (C)
-0.7
N.D.
+1.0
+0.7
+0.4
nitrogen source
L-Isoleucine (N)
-0.3
N.D.
+1.0
+0.2
+0.9
stress
Doxycycline hyclate 0.0001 mg/ml
-0.4
N.D.
+1.0
+0.5
+1.0
carbon source
carbon source Sucrose 5mM
+0.9
N.D.
+1.1
-0.0
+1.3
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