Fitness for 5 genes in Pseudomonas fluorescens FW300-N1B4

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500 ntPf1N1B4_4870 and Pf1N1B4_4871 are separated by 109 nucleotidesPf1N1B4_4871 and Pf1N1B4_4872 are separated by 80 nucleotidesPf1N1B4_4872 and Pf1N1B4_4873 are separated by 37 nucleotidesPf1N1B4_4873 and Pf1N1B4_4874 are separated by 258 nucleotides Pf1N1B4_4870 - Isoquinoline 1-oxidoreductase alpha subunit (EC 1.3.99.16), at 5,391,058 to 5,391,531 _4870 Pf1N1B4_4871 - Aldo-keto reductase, at 5,391,641 to 5,391,895 _4871 Pf1N1B4_4872 - Short-chain dehydrogenase/reductase SDR, at 5,391,976 to 5,392,818 _4872 Pf1N1B4_4873 - clavaldehyde dehydrogenase, at 5,392,856 to 5,393,617 _4873 Pf1N1B4_4874 - hypothetical protein, at 5,393,876 to 5,394,127 _4874
Group Condition Pf1N1B4_4870 Pf1N1B4_4871 Pf1N1B4_4872 Pf1N1B4_4873 Pf1N1B4_4874
carbon source octanoate (C) -1.9 N.D. -1.5 +0.4 +0.3
stress nitrate 100 mM -0.8 N.D. -0.4 -0.9 -0.2
carbon source carbon source Sucrose 1mM -2.6 N.D. -0.0 +0.3 +0.1
carbon source L-Histidine (C) -0.8 N.D. -1.0 -0.2 +0.4
carbon source butyrate (C) -2.2 N.D. +0.2 +0.1 +0.4
nitrogen source Uridine (N) -2.0 N.D. -0.2 -0.3 +0.9
carbon source carbon source Sucrose 5mM -1.5 N.D. -0.3 +0.4 +0.0
phagefrs Time6-FRS -0.6 N.D. +0.8 -0.6 -1.1
carbon source D-Trehalose (C) -1.9 N.D. +0.1 +0.2 +0.4
stress Choline Lysine 6 mM +0.8 N.D. +0.2 -1.0 -0.8
nophagecontrol Time16-nophage -1.1 N.D. +0.9 -0.1 -0.5
nitrogen source L-Leucine (N) -1.6 N.D. +0.4 +0.6 -0.3
carbon source L-Citrulline (C) -1.4 N.D. +0.6 +0.2 +0.6
carbon source Tween 20 (C) -1.2 N.D. +0.5 +0.5 +0.7
nitrogen source Putrescine (N) -0.8 N.D. +0.1 +0.3 +1.2
nitrogen source L-Methionine (N) -1.0 N.D. +1.1 +0.4 +0.3
nitrogen source L-Valine (N) -0.5 N.D. -0.2 +0.4 +1.2
carbon source L-Leucine (C) -1.0 N.D. +0.5 +0.5 +0.9
nitrogen source L-Citrulline (N) -0.8 N.D. +0.5 +0.4 +0.8
stress Fusidic 0.125 mg/ml -0.9 N.D. +0.4 +0.4 +1.0
anaerobic Nitrate reduction -0.1 N.D. -0.7 +0.6 +1.1
carbon source casaminos (C) -0.6 N.D. +0.7 +0.4 +0.6
carbon source Putrescine (C) -0.9 N.D. +0.5 +0.4 +1.2
carbon source carbon source Sucrose 1mM +0.4 N.D. +1.1 +0.3 -0.6
nitrogen source Carnitine Hydrochloride (N) -0.6 N.D. +0.5 +0.7 +0.6
carbon source Carnitine Hydrochloride (C) -1.1 N.D. +0.9 +0.6 +0.8
carbon source Uridine (C) -0.7 N.D. +1.0 +0.7 +0.4
nitrogen source L-Isoleucine (N) -0.3 N.D. +1.0 +0.2 +0.9
stress Doxycycline hyclate 0.0001 mg/ml -0.4 N.D. +1.0 +0.5 +1.0
carbon source carbon source Sucrose 5mM +0.9 N.D. +1.1 -0.0 +1.3
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