Fitness for 5 genes in Pseudomonas fluorescens FW300-N1B4

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500 ntPf1N1B4_4838 and Pf1N1B4_4839 are separated by 12 nucleotidesPf1N1B4_4839 and Pf1N1B4_4840 are separated by 1 nucleotidesPf1N1B4_4840 and Pf1N1B4_4841 are separated by 685 nucleotidesPf1N1B4_4841 and Pf1N1B4_4842 overlap by 4 nucleotides Pf1N1B4_4838 - Putative lipase, at 5,343,703 to 5,345,832 _4838 Pf1N1B4_4839 - lipoprotein, at 5,345,845 to 5,346,639 _4839 Pf1N1B4_4840 - hypothetical protein, at 5,346,641 to 5,346,766 _4840 Pf1N1B4_4841 - hypothetical protein, at 5,347,452 to 5,348,303 _4841 Pf1N1B4_4842 - VgrG protein, at 5,348,300 to 5,350,372 _4842
Group Condition Pf1N1B4_4838 Pf1N1B4_4839 Pf1N1B4_4840 Pf1N1B4_4841 Pf1N1B4_4842
stress Rifampicin 0.004 mg/ml -0.5 -2.2 N.D. N.D. -0.3
phagefrs Time16-FRS -0.9 -1.7 N.D. N.D. -0.1
carbon source Carnitine Hydrochloride (C) -0.8 -1.0 N.D. N.D. -0.1
pH Minimal media pH9 -0.4 -0.8 N.D. N.D. -0.6
carbon source octanoate (C) -1.0 -1.4 N.D. N.D. +0.6
carbon source carbon source Sucrose 0.25mM +0.3 -1.7 N.D. N.D. -0.4
carbon source Uridine (C) -0.5 -1.1 N.D. N.D. -0.2
phagefrs Time6-FRS -0.9 -0.7 N.D. N.D. -0.1
phagefrs Time16-FRS -0.8 -0.8 N.D. N.D. +0.1
carbon source L-Leucine (C) -0.3 -1.5 N.D. N.D. +0.2
stress nitrite 10 mM +0.3 -1.2 N.D. N.D. -0.5
nophagecontrol TIme6-nophage -0.4 -0.7 N.D. N.D. -0.3
stress nitrite 10 mM -0.1 -1.2 N.D. N.D. +0.1
temperature LB 37C +0.5 -1.0 N.D. N.D. -0.7
nophagecontrol Time16-nophage -0.5 -0.9 N.D. N.D. +0.3
stress Cholin acetate 20 mM -0.6 -0.8 N.D. N.D. +0.2
nitrogen source Cytidine (N) -0.1 -1.6 N.D. N.D. +0.6
nitrogen source Uridine (N) +0.1 -2.0 N.D. N.D. +0.9
carbon source carbon source Sucrose 1mM -0.8 -0.4 N.D. N.D. +0.2
lb LB -0.1 -1.1 N.D. N.D. +0.2
carbon source carbon source Sucrose 5mM +0.0 -1.4 N.D. N.D. +0.5
nitrogen source nitrate (N) -0.1 -1.3 N.D. N.D. +0.5
stress Paraquat dichloride 0.016 mg/mL +0.4 -0.8 N.D. N.D. -0.4
phagefrs Time6-FRS -0.4 +0.3 N.D. N.D. -0.7
nitrogen source Cytosine (N) -0.2 -1.0 N.D. N.D. +0.5
carbon source carbon source Sucrose 1mM +0.3 -1.4 N.D. N.D. +0.4
nophagecontrol TIme6-nophage -0.8 +0.2 N.D. N.D. +0.3
nitrogen source Ammonium chloride (N) +0.1 -0.8 N.D. N.D. +0.4
stress Fusidic 0.125 mg/ml -0.2 +1.3 N.D. N.D. +0.0
denitrifying Nitrate reduction, replicate B +0.4 +0.8 N.D. N.D. +0.3
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