Fitness for 5 genes in Pseudomonas fluorescens FW300-N1B4

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500 ntPf1N1B4_4819 and Pf1N1B4_4820 are separated by 65 nucleotidesPf1N1B4_4820 and Pf1N1B4_4821 are separated by 17 nucleotidesPf1N1B4_4821 and Pf1N1B4_4822 overlap by 20 nucleotidesPf1N1B4_4822 and Pf1N1B4_4823 overlap by 4 nucleotides Pf1N1B4_4819 - Multidrug resistance protein B, at 5,322,863 to 5,324,107 _4819 Pf1N1B4_4820 - ortholog of Bordetella pertussis (BX470248) BP2750, at 5,324,173 to 5,324,727 _4820 Pf1N1B4_4821 - Paraquat-inducible protein B, at 5,324,745 to 5,326,400 _4821 Pf1N1B4_4822 - Paraquat-inducible protein A, at 5,326,381 to 5,327,061 _4822 Pf1N1B4_4823 - Paraquat-inducible protein A, at 5,327,058 to 5,327,654 _4823
Group Condition Pf1N1B4_4819 Pf1N1B4_4820 Pf1N1B4_4821 Pf1N1B4_4822 Pf1N1B4_4823
temperature LB 37C +0.2 N.D. N.D. -1.6 -0.7
nitrogen source nitrogen source nitrite 0.1mM +0.1 N.D. N.D. -1.7 -0.2
nitrogen source Cytidine (N) +0.2 N.D. N.D. -1.5 -0.2
nophagecontrol Time16-nophage -0.1 N.D. N.D. -1.3 -0.1
denitrifying Nitrate reduction, replicate C t1 -0.0 N.D. N.D. -1.3 +0.0
nitrogen source Adenine (N) +0.3 N.D. N.D. -0.6 -0.9
stress Doxycycline hyclate 0.0001 mg/ml +0.0 N.D. N.D. -0.5 -0.7
nitrogen source nitrogen source nitrate 20mM -0.6 N.D. N.D. -0.7 +0.2
nitrogen source Uridine (N) +0.2 N.D. N.D. -1.6 +0.1
denitrifying Nitrate reduction, replicate B -0.3 N.D. N.D. -0.7 +0.3
anaerobic Nitrate reduction +0.4 N.D. N.D. +0.3 -0.6
nitrogen source nitrogen source Ammonium chloride 20mM +0.3 N.D. N.D. -0.6 +0.4
carbon source Uridine (C) +0.4 N.D. N.D. -0.6 +0.4
anaerobic N2E2wt with N1B4m denitrifying repB +0.2 N.D. N.D. +0.7 -0.8
nitrogen source D-Alanine (N) +0.3 N.D. N.D. -0.6 +0.6
stress methylglyoxal 0.008 vol% +0.2 N.D. N.D. +0.9 -0.8
carbon source D-Galacturonic Acid (C) +0.4 N.D. N.D. -0.6 +0.6
stress Gentamicin 0.001 mg/ml -0.1 N.D. N.D. +0.9 -0.3
stress sodium fluoride 12.5 mM +0.6 N.D. N.D. +0.6 -0.7
carbon source octanoate (C) +0.2 N.D. N.D. -0.6 +1.0
nitrogen source L-Valine (N) +0.5 N.D. N.D. -0.2 +0.7
carbon source L-Leucine (C) +0.6 N.D. N.D. -0.2 +0.8
nitrogen source L-Methionine (N) +0.6 N.D. N.D. -0.4 +1.0
stress Fusidic 0.0625 mg/ml +0.4 N.D. N.D. +0.7 +0.1
anaerobic N2E2wt with N1B4m denitrifying repA +0.1 N.D. N.D. +0.6 +0.6
carbon source L-Citrulline (C) +0.2 N.D. N.D. +0.6 +0.7
lb LB +0.3 N.D. N.D. +0.5 +0.6
nitrogen source Putrescine (N) +0.4 N.D. N.D. +0.3 +0.7
carbon source D-Mannose (C) +0.3 N.D. N.D. +0.5 +0.8
carbon source L-Isoleucine (C) +0.3 N.D. N.D. +1.1 +0.3
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