Fitness for 5 genes in Pseudomonas fluorescens FW300-N1B4

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500 ntPf1N1B4_4748 and Pf1N1B4_4749 are separated by 246 nucleotidesPf1N1B4_4749 and Pf1N1B4_4750 are separated by 1615 nucleotidesPf1N1B4_4750 and Pf1N1B4_4751 are separated by 161 nucleotidesPf1N1B4_4751 and Pf1N1B4_4752 are separated by 222 nucleotides Pf1N1B4_4748 - transporter, putative, at 5,243,344 to 5,244,531 _4748 Pf1N1B4_4749 - ABC transporter ATP-binding protein uup, at 5,244,778 to 5,246,343 _4749 Pf1N1B4_4750 - Fe(2+)/alpha-ketoglutarate-dependent dioxygenase LpxO, at 5,247,959 to 5,248,795 _4750 Pf1N1B4_4751 - Ku domain protein, at 5,248,957 to 5,249,817 _4751 Pf1N1B4_4752 - FIG00962948: hypothetical protein, at 5,250,040 to 5,250,384 _4752
Group Condition Pf1N1B4_4748 Pf1N1B4_4749 Pf1N1B4_4750 Pf1N1B4_4751 Pf1N1B4_4752
carbon source octanoate (C) -0.3 -0.6 -1.8 +0.2 N.D.
stress Doxycycline hyclate 0.0001 mg/ml -1.3 +0.2 -1.1 -0.1 N.D.
stress Nalidixic 0.004 mg/ml -0.9 -0.7 -0.4 -0.1 N.D.
carbon source D-Lactate (C) -0.9 -0.2 -0.2 -0.2 N.D.
stress Fusidic 0.125 mg/ml +0.2 +0.0 -1.2 -0.3 N.D.
anaerobic Nitrate reduction -0.5 -0.5 +0.4 -0.3 N.D.
stress Carbenicillin 2 mg/ml -0.1 -0.9 +0.6 -0.2 N.D.
nitrogen source nitrogen source nitrate 20mM -0.7 -0.3 +0.3 +0.2 N.D.
carbon source carbon source Sucrose 0.25mM -1.0 +0.5 +0.7 -0.5 N.D.
stress Fusidic 0.0625 mg/ml +0.3 +0.3 -0.6 -0.3 N.D.
denitrifying Nitrate reduction, replicate A t1 +0.3 -0.5 +0.3 -0.4 N.D.
stress 1-ethyl-3-methylimidazolium chloride 80 mM -0.9 -0.0 +0.4 +0.3 N.D.
temperature LB 37C -0.5 +0.2 +0.7 -0.5 N.D.
nitrogen source nitrogen source nitrite 0.1mM +0.0 +0.4 +0.4 -0.8 N.D.
carbon source L-Leucine (C) -0.5 +0.8 +0.1 -0.2 N.D.
pH Minimal media pH9 +0.5 -0.2 +0.6 -0.4 N.D.
carbon source carbon source Sucrose 0.25mM +0.1 +0.0 +1.0 -0.3 N.D.
pH Minimal media pH9 +0.2 -0.1 +1.0 -0.2 N.D.
nitrogen source Adenine (N) -0.3 +0.2 +0.2 +1.0 N.D.
nitrogen source Uridine (N) -0.4 -0.1 +0.5 +1.2 N.D.
stress nitrate 100 mM +0.4 +0.2 +1.0 -0.2 N.D.
stress Cisplatin 0.006 mg/ml -0.1 +0.4 +0.4 +0.8 N.D.
lb LB +0.4 +0.2 +0.0 +0.8 N.D.
nitrogen source nitrate (N) +0.2 -0.3 +0.1 +1.5 N.D.
stress Thallium(I) acetate 0.008 mg/ml +0.2 +0.4 +0.1 +0.9 N.D.
carbon source carbon source Sucrose 1mM -0.0 -0.1 +1.1 +0.8 N.D.
nitrogen source Cytosine (N) +0.2 -0.1 +0.2 +1.5 N.D.
stress Choline chloride 200 mM +0.3 +0.3 +1.0 +0.4 N.D.
stress Cisplatin 0.006 mg/ml +0.5 +0.7 +0.4 +0.5 N.D.
carbon source carbon source Sucrose 1mM +0.5 +0.2 +0.7 +0.9 N.D.
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