Fitness for 5 genes in Pseudomonas fluorescens FW300-N1B4

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500 ntPf1N1B4_4722 and Pf1N1B4_4723 are separated by 194 nucleotidesPf1N1B4_4723 and Pf1N1B4_4724 are separated by 198 nucleotidesPf1N1B4_4724 and Pf1N1B4_4725 are separated by 272 nucleotidesPf1N1B4_4725 and Pf1N1B4_4726 overlap by 4 nucleotides Pf1N1B4_4722 - Histone acetyltransferase HPA2 and related acetyltransferases, at 5,218,096 to 5,218,587 _4722 Pf1N1B4_4723 - UPF0141 membrane protein YijP possibly required for phosphoethanolamine modification of lipopolysaccharide, at 5,218,782 to 5,220,527 _4723 Pf1N1B4_4724 - FIG00961385: hypothetical protein, at 5,220,726 to 5,220,908 _4724 Pf1N1B4_4725 - 6-phosphogluconate dehydrogenase, decarboxylating (EC 1.1.1.44), at 5,221,181 to 5,222,161 _4725 Pf1N1B4_4726 - Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49), at 5,222,158 to 5,223,681 _4726
Group Condition Pf1N1B4_4722 Pf1N1B4_4723 Pf1N1B4_4724 Pf1N1B4_4725 Pf1N1B4_4726
temperature LB 37C N.D. -1.5 N.D. -0.8 -0.4
phagefrs Time6-FRS N.D. -2.5 N.D. -0.3 +0.0
nophagecontrol TIme6-nophage N.D. -1.0 N.D. -0.8 -0.2
stress Aluminum chloride 2.5 mM N.D. -1.7 N.D. -0.2 -0.1
carbon source D-Mannose (C) N.D. -0.4 N.D. -0.9 -0.1
stress Paraquat dichloride 0.016 mg/mL N.D. +0.4 N.D. -1.3 -0.3
carbon source acetate (C) N.D. -0.9 N.D. -0.3 +0.1
nitrogen source Cytosine (N) N.D. -1.4 N.D. +0.2 +0.1
carbon source carbon source Sucrose 0.25mM N.D. -1.0 N.D. -0.3 +0.3
carbon source acetate (C) N.D. -0.8 N.D. +0.3 -0.3
denitrifying Denitrifying in presence of WT Pseudomonas N2-E3; replicate C; timepoint 1 N.D. -0.2 N.D. -0.8 +0.4
nitrogen source nitrogen source Ammonium chloride 20mM N.D. -1.2 N.D. +0.5 +0.1
carbon source carbon source Sucrose 1mM N.D. -0.7 N.D. -0.3 +0.5
temperature LB 30C N.D. -0.8 N.D. +0.4 +0.3
nitrogen source L-Isoleucine (N) N.D. +0.7 N.D. -0.4 -0.4
stress Cisplatin 0.006 mg/ml N.D. -0.7 N.D. +0.8 -0.1
nitrogen source Cytidine (N) N.D. -1.0 N.D. +0.7 +0.4
carbon source carbon source Sucrose 0.25mM N.D. -0.5 N.D. +0.9 +0.2
stress methylglyoxal 0.008 vol% N.D. +0.4 N.D. +0.5 -0.4
nitrogen source L-Citrulline (N) N.D. +0.3 N.D. +0.8 -0.3
carbon source octanoate (C) N.D. +0.7 N.D. -0.3 +0.3
carbon source butyrate (C) N.D. +0.7 N.D. +0.6 -0.3
temperature LB 37C N.D. +0.9 N.D. -0.2 +0.3
stress Rifampicin 0.004 mg/ml N.D. -0.0 N.D. +1.0 +0.3
stress Carbenicillin 2 mg/ml N.D. +1.6 N.D. -0.2 -0.0
nitrogen source Adenine (N) N.D. +0.2 N.D. +0.8 +0.4
denitrifying Nitrate reduction in presence of wild-type Pseudomonas N2-E2; replicate B N.D. +0.7 N.D. +0.6 +0.2
stress Fusidic 0.0625 mg/ml N.D. +0.6 N.D. +0.6 +0.4
stress Fusidic 0.125 mg/ml N.D. +0.3 N.D. +1.3 +0.1
stress Doxycycline hyclate 0.0001 mg/ml N.D. +1.1 N.D. +1.3 -0.2
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Pf1N1B4_4722
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Pf1N1B4_4726
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