Fitness for 5 genes in Pseudomonas fluorescens FW300-N1B4

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500 ntPf1N1B4_4717 and Pf1N1B4_4718 are separated by 207 nucleotidesPf1N1B4_4718 and Pf1N1B4_4719 are separated by 52 nucleotidesPf1N1B4_4719 and Pf1N1B4_4720 are separated by 146 nucleotidesPf1N1B4_4720 and Pf1N1B4_4721 are separated by 18 nucleotides Pf1N1B4_4717 - Agmatinase (EC 3.5.3.11), at 5,213,837 to 5,214,796 _4717 Pf1N1B4_4718 - Transcriptional regulator, DeoR family, at 5,215,004 to 5,215,720 _4718 Pf1N1B4_4719 - Electron transfer flavoprotein, beta subunit, at 5,215,773 to 5,216,114 _4719 Pf1N1B4_4720 - AFG1-like ATPase, at 5,216,261 to 5,217,379 _4720 Pf1N1B4_4721 - Nuclease inhibitor, at 5,217,398 to 5,217,979 _4721
Group Condition Pf1N1B4_4717 Pf1N1B4_4718 Pf1N1B4_4719 Pf1N1B4_4720 Pf1N1B4_4721
carbon source carbon source Sucrose 5mM -1.5 N.D. N.D. N.D. -1.4
carbon source carbon source Sucrose 5mM -1.7 N.D. N.D. N.D. -0.3
temperature LB 37C -1.1 N.D. N.D. N.D. -0.4
anaerobic Nitrate reduction +0.1 N.D. N.D. N.D. -1.6
temperature LB 37C -0.1 N.D. N.D. N.D. -1.3
denitrifying Nitrate reduction, replicate A -0.2 N.D. N.D. N.D. -1.2
carbon source carbon source Sucrose 1mM -1.2 N.D. N.D. N.D. -0.1
anaerobic Nitrate reduction +0.4 N.D. N.D. N.D. -1.5
carbon source L-Arginine (C) -1.3 N.D. N.D. N.D. +0.2
denitrifying Nitrate reduction, replicate C t3 -1.8 N.D. N.D. N.D. +0.8
stress Aluminum chloride 2.5 mM -1.2 N.D. N.D. N.D. +0.3
carbon source L-Lactate (C) -1.2 N.D. N.D. N.D. +0.6
denitrifying Nitrate reduction, replicate C t2 -1.0 N.D. N.D. N.D. +0.6
anaerobic N2E2wt with N1B4m denitrifying repB +0.8 N.D. N.D. N.D. -1.1
carbon source carbon source Sucrose 0.25mM +1.1 N.D. N.D. N.D. -1.3
nitrogen source nitrogen source Ammonium chloride 20mM +0.7 N.D. N.D. N.D. -0.6
nitrogen source Cytidine (N) -0.7 N.D. N.D. N.D. +0.8
nophagecontrol TIme6-nophage +0.7 N.D. N.D. N.D. -0.5
carbon source carbon source Sucrose 1mM +0.9 N.D. N.D. N.D. -0.4
nitrogen source nitrogen source nitrate 20mM +1.3 N.D. N.D. N.D. -0.6
stress Spectinomycin 0.05 mg/ml +1.2 N.D. N.D. N.D. -0.3
stress nitrite 10 mM +1.0 N.D. N.D. N.D. +0.2
nitrogen source Thymine (N) +0.2 N.D. N.D. N.D. +1.0
denitrifying Denitrifying in presence of WT Pseudomonas N2-E3; replicate C; timepoint 1 +1.4 N.D. N.D. N.D. -0.1
stress sodium fluoride 12.5 mM +0.9 N.D. N.D. N.D. +0.6
nitrogen source nitrate (N) +0.9 N.D. N.D. N.D. +0.6
nitrogen source Uridine (N) +1.0 N.D. N.D. N.D. +0.5
stress Doxycycline hyclate 0.0001 mg/ml +0.7 N.D. N.D. N.D. +0.9
nitrogen source Adenine (N) +0.7 N.D. N.D. N.D. +1.0
carbon source octanoate (C) +0.8 N.D. N.D. N.D. +1.2
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