Fitness for 5 genes in Pseudomonas fluorescens FW300-N1B4

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500 ntPf1N1B4_4686 and Pf1N1B4_4687 are separated by 55 nucleotidesPf1N1B4_4687 and Pf1N1B4_4688 are separated by 600 nucleotidesPf1N1B4_4688 and Pf1N1B4_4689 are separated by 13 nucleotidesPf1N1B4_4689 and Pf1N1B4_4690 are separated by 221 nucleotides Pf1N1B4_4686 - Malto-oligosyltrehalose trehalohydrolase (EC 3.2.1.141), at 5,176,537 to 5,178,291 _4686 Pf1N1B4_4687 - Glycogen synthase, ADP-glucose transglucosylase (EC 2.4.1.21), at 5,178,347 to 5,179,933 _4687 Pf1N1B4_4688 - D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95), at 5,180,534 to 5,181,487 _4688 Pf1N1B4_4689 - hydrolase, alpha/beta fold family, at 5,181,501 to 5,182,544 _4689 Pf1N1B4_4690 - probable membrane protein YPO3302, at 5,182,766 to 5,183,200 _4690
Group Condition Pf1N1B4_4686 Pf1N1B4_4687 Pf1N1B4_4688 Pf1N1B4_4689 Pf1N1B4_4690
phagefrs Time6-FRS -0.4 -0.5 -0.6 +0.2 N.D.
nitrogen source nitrogen source nitrite 0.1mM -0.5 -0.1 -0.5 +0.1 N.D.
nitrogen source L-Isoleucine (N) +0.3 -0.4 +0.1 -0.5 N.D.
denitrifying Denitrifying in presence of WT Pseudomonas N2-E3; replicate C; timepoint 1 -0.4 +0.5 -0.0 -0.5 N.D.
anaerobic Nitrate reduction -0.4 -0.4 +0.2 +0.2 N.D.
carbon source carbon source Sucrose 0.25mM -0.1 +0.6 -0.4 -0.2 N.D.
carbon source butyrate (C) +0.3 +0.4 -0.4 -0.4 N.D.
carbon source carbon source Sucrose 1mM -0.5 +0.5 +0.3 -0.1 N.D.
stress Fusidic 0.125 mg/ml +0.2 +0.3 +0.5 -0.5 N.D.
carbon source D-Lactate (C) +0.3 +0.6 -0.2 -0.2 N.D.
denitrifying Nitrate reduction, replicate A t1 +0.2 +0.5 +0.3 -0.3 N.D.
denitrifying Nitrate reduction, replicate C t3 +0.1 +0.9 -0.2 -0.0 N.D.
carbon source carbon source Sucrose 0.5mM -0.2 +0.5 +0.6 -0.1 N.D.
carbon source L-Arabinose (C) -0.0 +1.0 -0.0 -0.1 N.D.
nitrogen source nitrogen source nitrite 1mM +0.4 +0.5 +0.2 -0.1 N.D.
carbon source D-Fructose (C) +0.2 +0.9 -0.1 +0.1 N.D.
carbon source pyruvate (C) +0.2 +0.4 +0.2 +0.4 N.D.
carbon source D-Ribose (C) +0.4 +0.7 +0.2 +0.0 N.D.
carbon source Uridine (C) +0.4 +1.1 +0.1 -0.2 N.D.
carbon source D-Lactate (C) +0.3 +0.9 -0.0 +0.2 N.D.
carbon source Carnitine Hydrochloride (C) +0.4 +0.6 +0.3 +0.1 N.D.
carbon source L-Valine (C) +0.2 +1.0 +0.3 -0.1 N.D.
carbon source carbon source Sucrose 5mM +0.1 +0.7 +0.9 -0.2 N.D.
carbon source L-Arabinose (C) +0.3 +1.2 +0.1 -0.0 N.D.
carbon source L-Isoleucine (C) +0.5 +1.2 -0.1 +0.1 N.D.
nitrogen source Uridine (N) +0.2 +1.1 +0.4 -0.1 N.D.
nitrogen source Cytidine (N) +0.3 +0.9 +0.1 +0.4 N.D.
nitrogen source Thymine (N) +0.3 +1.3 +0.3 -0.1 N.D.
nitrogen source D-Glucosamine Hydrochloride (N) +0.3 +1.1 +0.5 -0.2 N.D.
carbon source Cytidine (C) +0.5 +1.2 +0.1 -0.0 N.D.
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