Fitness for 5 genes in Pseudomonas fluorescens FW300-N1B4

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 191 experiments or choose conditions or try the comparative fitness browser

500 ntPf1N1B4_4647 and Pf1N1B4_4648 are separated by 228 nucleotidesPf1N1B4_4648 and Pf1N1B4_4649 are separated by 428 nucleotidesPf1N1B4_4649 and Pf1N1B4_4650 are separated by 159 nucleotidesPf1N1B4_4650 and Pf1N1B4_4651 are separated by 92 nucleotides Pf1N1B4_4647 - 4-carboxymuconolactone decarboxylase domain/alkylhydroperoxidase AhpD family core domain protein, at 5,126,807 to 5,127,247 _4647 Pf1N1B4_4648 - transcriptional regulator, MerR family, at 5,127,476 to 5,128,453 _4648 Pf1N1B4_4649 - Protein export cytoplasm protein SecA ATPase RNA helicase (TC 3.A.5.1.1), at 5,128,882 to 5,129,391 _4649 Pf1N1B4_4650 - Aspartate racemase (EC 5.1.1.13), at 5,129,551 to 5,130,243 _4650 Pf1N1B4_4651 - Transcriptional regulator, AraC family, at 5,130,336 to 5,131,112 _4651
Group Condition Pf1N1B4_4647 Pf1N1B4_4648 Pf1N1B4_4649 Pf1N1B4_4650 Pf1N1B4_4651
carbon source D-Glucose (C) N.D. -1.2 N.D. -0.3 -0.3
nitrogen source nitrate (N) N.D. -1.0 N.D. -0.4 -0.3
stress sodium fluoride 12.5 mM N.D. -1.4 N.D. +0.0 -0.2
denitrifying Nitrate reduction, replicate B t2 N.D. -0.4 N.D. -0.2 -0.7
carbon source D-Fructose (C) N.D. -1.6 N.D. +0.3 +0.3
carbon source carbon source Sucrose 0.25mM N.D. -0.5 N.D. +0.3 -0.7
nitrogen source nitrogen source Ammonium chloride 20mM N.D. -0.3 N.D. +0.3 -0.7
nitrogen source L-Methionine (N) N.D. -1.1 N.D. -0.1 +0.5
carbon source carbon source Sucrose 1mM N.D. +0.1 N.D. +0.5 -0.9
carbon source carbon source Sucrose 5mM N.D. +0.9 N.D. -0.2 -0.2
stress Nalidixic 0.004 mg/ml N.D. -0.3 N.D. +1.0 -0.1
stress Cisplatin 0.006 mg/ml N.D. +0.3 N.D. +0.7 -0.3
stress acetate 20 mM N.D. +0.7 N.D. +0.4 -0.4
carbon source carbon source Sucrose 1mM N.D. +1.2 N.D. -0.3 -0.1
stress Cholin acetate 20 mM N.D. +0.6 N.D. +0.6 -0.3
carbon source octanoate (C) N.D. +0.6 N.D. +0.8 -0.5
stress Cholin acetate 10 mM N.D. +0.9 N.D. +0.3 -0.1
nitrogen source Carnitine Hydrochloride (N) N.D. +0.3 N.D. +1.0 -0.1
lb LB N.D. +0.8 N.D. +0.3 +0.2
stress Tetracycline 0.0004 mg/ml N.D. +0.9 N.D. +0.3 +0.1
nitrogen source D-Alanine (N) N.D. +0.6 N.D. +0.7 +0.0
lb LB N.D. +0.8 N.D. +0.3 +0.3
temperature LB 37C N.D. +0.8 N.D. +0.4 +0.2
carbon source L-Glutamine (C) N.D. +0.8 N.D. +0.6 +0.0
stress Chloride 300 mM N.D. +1.2 N.D. +0.3 -0.1
stress 5-Hydroxymethylfurfural 2.5 mM N.D. +0.9 N.D. +0.7 -0.0
carbon source L-Glutamic (C) N.D. +1.0 N.D. +0.5 +0.1
denitrifying Denitrifying in presence of WT Pseudomonas N2-E3; replicate B; timepoint 1 N.D. +0.9 N.D. +0.8 -0.1
stress Sisomicin 0.001 mg/ml N.D. +1.1 N.D. +0.8 +0.1
stress methylglyoxal 0.008 vol% N.D. +1.2 N.D. +1.0 +0.2
remove
Pf1N1B4_4647
plot
remove
Pf1N1B4_4648
plot
remove
Pf1N1B4_4649
remove
Pf1N1B4_4650
plot
remove
Pf1N1B4_4651
plot