Fitness for 5 genes in Pseudomonas fluorescens FW300-N1B4

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500 ntPf1N1B4_4632 and Pf1N1B4_4633 overlap by 4 nucleotidesPf1N1B4_4633 and Pf1N1B4_4634 are separated by 248 nucleotidesPf1N1B4_4634 and Pf1N1B4_4635 overlap by 4 nucleotidesPf1N1B4_4635 and Pf1N1B4_4636 overlap by 4 nucleotides Pf1N1B4_4632 - Exonuclease SbcC, at 5,105,812 to 5,109,453 _4632 Pf1N1B4_4633 - Exonuclease SbcD, at 5,109,450 to 5,110,706 _4633 Pf1N1B4_4634 - BatD, at 5,110,955 to 5,112,604 _4634 Pf1N1B4_4635 - TPR domain protein in aerotolerance operon, at 5,112,601 to 5,112,732 _4635 Pf1N1B4_4636 - TPR domain protein in aerotolerance operon, at 5,112,729 to 5,114,336 _4636
Group Condition Pf1N1B4_4632 Pf1N1B4_4633 Pf1N1B4_4634 Pf1N1B4_4635 Pf1N1B4_4636
stress Carbenicillin 2 mg/ml -0.5 N.D. N.D. N.D. -3.3
stress Cisplatin 0.006 mg/ml -0.8 N.D. N.D. N.D. -2.3
stress Chloride 200 mM -0.9 N.D. N.D. N.D. -1.7
stress Doxycycline hyclate 0.0001 mg/ml -0.1 N.D. N.D. N.D. -2.5
stress Rifampicin 0.004 mg/ml -0.4 N.D. N.D. N.D. -2.2
stress Cisplatin 0.006 mg/ml -0.5 N.D. N.D. N.D. -2.0
stress Spectinomycin 0.05 mg/ml -0.5 N.D. N.D. N.D. -1.9
stress 1-ethyl-3-methylimidazolium chloride 80 mM +0.2 N.D. N.D. N.D. -2.1
carbon source octanoate (C) -0.9 N.D. N.D. N.D. -1.1
stress Tetracycline 0.0004 mg/ml -0.9 N.D. N.D. N.D. -1.0
anaerobic Nitrate reduction -0.6 N.D. N.D. N.D. -1.2
stress Chloride 300 mM -1.0 N.D. N.D. N.D. -0.8
stress Choline chloride 200 mM -0.8 N.D. N.D. N.D. -0.9
stress Gentamicin 0.001 mg/ml -0.1 N.D. N.D. N.D. -1.5
stress Cobalt chloride 0.3125 mM -0.7 N.D. N.D. N.D. -0.8
lb LB -0.5 N.D. N.D. N.D. -1.0
stress Bacitracin 2 mg/ml +0.4 N.D. N.D. N.D. -1.9
nitrogen source Ammonium chloride (N) -0.6 N.D. N.D. N.D. -0.7
temperature LB 37C +1.1 N.D. N.D. N.D. -2.2
stress Chlorite 1 mM +0.3 N.D. N.D. N.D. -1.4
carbon source carbon source Sucrose 1mM -1.2 N.D. N.D. N.D. +0.9
nitrogen source Adenine (N) -0.8 N.D. N.D. N.D. +0.6
stress Choline Lysine 6 mM -1.2 N.D. N.D. N.D. +1.1
pH Minimal media pH9 -0.7 N.D. N.D. N.D. +1.3
carbon source carbon source Sucrose 1mM -0.6 N.D. N.D. N.D. +1.4
denitrifying Denitrifying in presence of WT Pseudomonas N2-E3; replicate C; timepoint 1 +0.6 N.D. N.D. N.D. +0.9
carbon source carbon source Sucrose 0.25mM -0.4 N.D. N.D. N.D. +2.0
pH Minimal media pH9 +0.3 N.D. N.D. N.D. +1.5
carbon source carbon source Sucrose 0.5mM +0.4 N.D. N.D. N.D. +1.6
carbon source carbon source Sucrose 0.25mM -0.7 N.D. N.D. N.D. +2.7
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Pf1N1B4_4632
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Pf1N1B4_4633
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Pf1N1B4_4635
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