Fitness for 5 genes in Pseudomonas fluorescens FW300-N1B4

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500 ntPf1N1B4_4605 and Pf1N1B4_4606 are separated by 125 nucleotidesPf1N1B4_4606 and Pf1N1B4_4607 are separated by 22 nucleotidesPf1N1B4_4607 and Pf1N1B4_4608 overlap by 25 nucleotidesPf1N1B4_4608 and Pf1N1B4_4609 overlap by 1 nucleotides Pf1N1B4_4605 - FIG00953564: hypothetical protein, at 5,077,968 to 5,078,918 _4605 Pf1N1B4_4606 - NAD kinase (EC 2.7.1.23), at 5,079,044 to 5,079,364 _4606 Pf1N1B4_4607 - NAD kinase (EC 2.7.1.23), at 5,079,387 to 5,079,728 _4607 Pf1N1B4_4608 - NAD kinase (EC 2.7.1.23), at 5,079,704 to 5,079,934 _4608 Pf1N1B4_4609 - Diadenosine tetraphosphatase and related serine/threonine protein phosphatases, at 5,079,934 to 5,080,398 _4609
Group Condition Pf1N1B4_4605 Pf1N1B4_4606 Pf1N1B4_4607 Pf1N1B4_4608 Pf1N1B4_4609
carbon source carbon source Sucrose 0.25mM -1.5 N.D. N.D. N.D. N.D.
nitrogen source nitrogen source nitrite 0.1mM -1.1 N.D. N.D. N.D. N.D.
carbon source carbon source Sucrose 1mM -1.0 N.D. N.D. N.D. N.D.
carbon source carbon source Sucrose 5mM -0.8 N.D. N.D. N.D. N.D.
carbon source D-Ribose (C) -0.8 N.D. N.D. N.D. N.D.
denitrifying Nitrate reduction, replicate C t1 -0.7 N.D. N.D. N.D. N.D.
carbon source L-Glutamic (C) -0.7 N.D. N.D. N.D. N.D.
carbon source L-Malic (C) -0.6 N.D. N.D. N.D. N.D.
carbon source L-Isoleucine (C) -0.6 N.D. N.D. N.D. N.D.
denitrifying Denitrifying in presence of WT Pseudomonas N2-E3; replicate B; timepoint 1 -0.6 N.D. N.D. N.D. N.D.
anaerobic N2E2wt with N1B4m denitrifying repA -0.6 N.D. N.D. N.D. N.D.
denitrifying Denitrifying in presence of WT Pseudomonas N2-E3; replicate C; timepoint 1 -0.5 N.D. N.D. N.D. N.D.
stress Fusidic 0.0625 mg/ml -0.5 N.D. N.D. N.D. N.D.
nitrogen source nitrogen source Ammonium chloride 20mM -0.5 N.D. N.D. N.D. N.D.
phagefrs Time6-FRS -0.5 N.D. N.D. N.D. N.D.
nitrogen source D-Alanine (N) -0.5 N.D. N.D. N.D. N.D.
nitrogen source L-Valine (N) -0.5 N.D. N.D. N.D. N.D.
nitrogen source D-Glucosamine Hydrochloride (N) +0.5 N.D. N.D. N.D. N.D.
carbon source carbon source Sucrose 0.5mM +0.5 N.D. N.D. N.D. N.D.
stress Bacitracin 2 mg/ml +0.5 N.D. N.D. N.D. N.D.
lb LB +0.5 N.D. N.D. N.D. N.D.
stress Doxycycline hyclate 0.0001 mg/ml +0.5 N.D. N.D. N.D. N.D.
nitrogen source Ammonium chloride (N) +0.5 N.D. N.D. N.D. N.D.
carbon source D-Fructose (C) +0.5 N.D. N.D. N.D. N.D.
stress Sisomicin 0.001 mg/ml +0.6 N.D. N.D. N.D. N.D.
stress Cholin acetate 20 mM +0.6 N.D. N.D. N.D. N.D.
stress Rifampicin 0.004 mg/ml +0.6 N.D. N.D. N.D. N.D.
stress Carbenicillin 2 mg/ml +0.7 N.D. N.D. N.D. N.D.
stress Gentamicin 0.001 mg/ml +0.7 N.D. N.D. N.D. N.D.
stress acetate 20 mM +0.7 N.D. N.D. N.D. N.D.
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