Fitness for 5 genes in Pseudomonas fluorescens FW300-N1B4

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500 ntPf1N1B4_4588 and Pf1N1B4_4589 are separated by 155 nucleotidesPf1N1B4_4589 and Pf1N1B4_4590 are separated by 183 nucleotidesPf1N1B4_4590 and Pf1N1B4_4591 are separated by 1 nucleotidesPf1N1B4_4591 and Pf1N1B4_4592 are separated by 1 nucleotides Pf1N1B4_4588 - Transcriptional regulator, at 5,058,446 to 5,059,312 _4588 Pf1N1B4_4589 - Enoyl-[acyl-carrier-protein] reductase [NADH] (EC 1.3.1.9), at 5,059,468 to 5,060,265 _4589 Pf1N1B4_4590 - Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1), at 5,060,449 to 5,061,900 _4590 Pf1N1B4_4591 - Oligopeptide transport system permease protein OppC (TC 3.A.1.5.1), at 5,061,902 to 5,062,921 _4591 Pf1N1B4_4592 - Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1), at 5,062,923 to 5,063,996 _4592
Group Condition Pf1N1B4_4588 Pf1N1B4_4589 Pf1N1B4_4590 Pf1N1B4_4591 Pf1N1B4_4592
stress Benzethonium chloride 0.0125 mM N.D. N.D. -0.1 N.D. -2.8
stress Rifampicin 0.004 mg/ml N.D. N.D. -0.9 N.D. -1.0
pH Minimal media pH9 N.D. N.D. +0.3 N.D. -2.0
pH Minimal media pH9 N.D. N.D. -0.3 N.D. -1.4
nitrogen source Cytosine (N) N.D. N.D. -0.4 N.D. -0.9
carbon source carbon source Sucrose 1mM N.D. N.D. -0.3 N.D. -0.8
anaerobic Nitrate reduction N.D. N.D. +0.1 N.D. -1.2
stress nitrite 10 mM N.D. N.D. +0.2 N.D. -1.3
denitrifying Nitrate reduction, replicate A t2 N.D. N.D. -1.1 N.D. +0.2
temperature LB 30C N.D. N.D. +0.2 N.D. -0.9
anaerobic Nitrate reduction N.D. N.D. -0.9 N.D. +0.3
nitrogen source nitrogen source nitrate 5mM N.D. N.D. +0.3 N.D. -0.8
carbon source Carnitine Hydrochloride (C) N.D. N.D. +0.4 N.D. -0.8
carbon source carbon source Sucrose 20mM N.D. N.D. +0.4 N.D. -0.8
nophagecontrol Time16-nophage N.D. N.D. +0.9 N.D. -1.1
stress Spectinomycin 0.025 mg/ml N.D. N.D. -0.7 N.D. +0.6
carbon source octanoate (C) N.D. N.D. +0.8 N.D. -0.8
carbon source m-Inositol (C) N.D. N.D. +0.7 N.D. -0.6
carbon source carbon source Sucrose 0.25mM N.D. N.D. -0.5 N.D. +0.8
nitrogen source D-Glucosamine Hydrochloride (N) N.D. N.D. +0.9 N.D. -0.4
stress Fusidic 0.125 mg/ml N.D. N.D. -0.2 N.D. +1.0
stress Aluminum chloride 2.5 mM N.D. N.D. +1.1 N.D. -0.0
carbon source Uridine (C) N.D. N.D. +1.0 N.D. +0.2
nitrogen source nitrogen source nitrite 0.1mM N.D. N.D. +0.6 N.D. +0.5
carbon source L-Histidine (C) N.D. N.D. +0.8 N.D. +0.4
carbon source L-Arginine (C) N.D. N.D. +0.5 N.D. +0.7
temperature LB 37C N.D. N.D. +1.1 N.D. +0.3
stress D-Cycloserine 0.1 mg/ml N.D. N.D. +0.5 N.D. +1.0
carbon source pyruvate (C) N.D. N.D. +0.7 N.D. +0.9
nitrogen source L-Methionine (N) N.D. N.D. +0.9 N.D. +0.9
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