Fitness for 5 genes in Pseudomonas fluorescens FW300-N1B4

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 191 experiments or choose conditions or try the comparative fitness browser

500 ntPf1N1B4_4539 and Pf1N1B4_4540 are separated by 136 nucleotidesPf1N1B4_4540 and Pf1N1B4_4541 are separated by 18 nucleotidesPf1N1B4_4541 and Pf1N1B4_4542 overlap by 4 nucleotidesPf1N1B4_4542 and Pf1N1B4_4543 are separated by 2 nucleotides Pf1N1B4_4539 - Uncharacterized protein homologous to Paeru. PA2364, at 5,006,565 to 5,007,014 _4539 Pf1N1B4_4540 - Uncharacterized protein ImpJ/VasE, at 5,007,151 to 5,008,482 _4540 Pf1N1B4_4541 - Inner membrane protein DotU, at 5,008,501 to 5,009,268 _4541 Pf1N1B4_4542 - IcmF-related protein, at 5,009,265 to 5,012,888 _4542 Pf1N1B4_4543 - IcmF-related protein, at 5,012,891 to 5,013,040 _4543
Group Condition Pf1N1B4_4539 Pf1N1B4_4540 Pf1N1B4_4541 Pf1N1B4_4542 Pf1N1B4_4543
carbon source carbon source Sucrose 0.25mM -0.8 -1.6 N.D. -0.5 N.D.
anaerobic N2E2wt with N1B4m denitrifying repB -0.1 -0.3 N.D. -2.0 N.D.
stress Doxycycline hyclate 0.0001 mg/ml -0.9 -1.4 N.D. -0.1 N.D.
carbon source carbon source Sucrose 0.25mM -0.6 -0.5 N.D. -0.9 N.D.
denitrifying Nitrate reduction in presence of wild-type Pseudomonas N2-E2; replicate B +0.2 -1.6 N.D. -0.3 N.D.
phagefrs Time6-FRS -0.4 -1.3 N.D. +0.3 N.D.
carbon source carbon source Sucrose 0.5mM -0.3 +0.5 N.D. -1.1 N.D.
stress nitrite 10 mM +0.5 -1.0 N.D. -0.1 N.D.
stress Chloride 300 mM -1.2 +0.5 N.D. +0.7 N.D.
nitrogen source L-Valine (N) +0.5 -0.9 N.D. +0.4 N.D.
carbon source L-Citrulline (C) +0.2 -0.8 N.D. +0.7 N.D.
lb LB +0.8 -0.7 N.D. +0.4 N.D.
carbon source octanoate (C) +0.7 -0.8 N.D. +0.6 N.D.
nitrogen source L-Methionine (N) +1.2 -0.7 N.D. +0.2 N.D.
stress Aluminum chloride 2.5 mM +0.7 -0.5 N.D. +0.4 N.D.
nitrogen source nitrate (N) +1.3 -0.4 N.D. -0.1 N.D.
nitrogen source D-Alanine (N) +0.8 -0.4 N.D. +0.4 N.D.
carbon source L-Valine (C) +0.8 -0.6 N.D. +0.5 N.D.
carbon source L-Asparagine (C) +0.6 -0.4 N.D. +0.6 N.D.
nitrogen source L-Leucine (N) +0.7 -0.4 N.D. +0.6 N.D.
carbon source acetate (C) +0.9 -0.5 N.D. +0.4 N.D.
nitrogen source Adenine (N) +1.4 -0.1 N.D. -0.4 N.D.
carbon source Carnitine Hydrochloride (C) +0.9 -0.5 N.D. +0.5 N.D.
nitrogen source Ammonium chloride (N) +1.5 -0.3 N.D. -0.2 N.D.
carbon source D-Galacturonic Acid (C) +0.8 -0.4 N.D. +0.6 N.D.
nitrogen source Cytosine (N) +1.7 -0.2 N.D. -0.1 N.D.
nitrogen source Thymine (N) +1.6 +0.2 N.D. -0.2 N.D.
nitrogen source Uridine (N) +1.7 -0.0 N.D. +0.2 N.D.
stress Fusidic 0.125 mg/ml +1.5 -0.1 N.D. +0.6 N.D.
nitrogen source Cytidine (N) +2.1 -0.1 N.D. +0.5 N.D.
remove
Pf1N1B4_4539
plot		 remove
Pf1N1B4_4540
plot		 remove
Pf1N1B4_4541		 remove
Pf1N1B4_4542
plot		 remove
Pf1N1B4_4543
plot