Fitness for 5 genes in Pseudomonas fluorescens FW300-N1B4

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500 ntPf1N1B4_4527 and Pf1N1B4_4528 are separated by 24 nucleotidesPf1N1B4_4528 and Pf1N1B4_4529 are separated by 190 nucleotidesPf1N1B4_4529 and Pf1N1B4_4530 are separated by 336 nucleotidesPf1N1B4_4530 and Pf1N1B4_4531 are separated by 12 nucleotides Pf1N1B4_4527 - Short-chain dehydrogenase/reductase SDR, at 4,991,158 to 4,991,925 _4527 Pf1N1B4_4528 - Predicted aminoglycoside phosphotransferase, at 4,991,950 to 4,993,017 _4528 Pf1N1B4_4529 - FIG00966904: hypothetical protein, at 4,993,208 to 4,993,603 _4529 Pf1N1B4_4530 - Phophatidylinositol-4-phosphate 5-kinase (EC 2.7.1.68), at 4,993,940 to 4,994,482 _4530 Pf1N1B4_4531 - FIG01221261: hypothetical protein, at 4,994,495 to 4,996,504 _4531
Group Condition Pf1N1B4_4527 Pf1N1B4_4528 Pf1N1B4_4529 Pf1N1B4_4530 Pf1N1B4_4531
carbon source carbon source Sucrose 1mM -1.5 -0.7 N.D. N.D. -0.2
carbon source carbon source Sucrose 0.25mM -0.4 -0.4 N.D. N.D. -1.5
stress Doxycycline hyclate 0.0001 mg/ml -0.1 -0.1 N.D. N.D. -1.8
carbon source carbon source Sucrose 5mM -1.0 -0.0 N.D. N.D. -0.8
carbon source carbon source Sucrose 0.5mM -1.2 +0.2 N.D. N.D. -0.8
stress Spectinomycin 0.05 mg/ml -0.3 +0.1 N.D. N.D. -1.5
nitrogen source L-Methionine (N) -0.1 +0.0 N.D. N.D. -1.6
nitrogen source nitrogen source nitrate 20mM -0.5 -0.1 N.D. N.D. -1.1
carbon source D-Fructose (C) -0.2 -0.4 N.D. N.D. -1.1
stress Nalidixic 0.004 mg/ml +0.1 +0.1 N.D. N.D. -1.9
nitrogen source D-Alanine (N) -0.3 -0.2 N.D. N.D. -1.1
phagefrs Time6-FRS +0.1 -0.3 N.D. N.D. -1.2
stress 5-Hydroxymethylfurfural 2.5 mM +0.2 +0.1 N.D. N.D. -1.5
stress Sisomicin 0.001 mg/ml +0.1 +0.1 N.D. N.D. -1.4
stress Spectinomycin 0.025 mg/ml -0.3 +0.2 N.D. N.D. -1.1
denitrifying Nitrate reduction, replicate C t3 -0.5 +0.5 N.D. N.D. -0.8
stress Cholin acetate 10 mM +0.7 -0.2 N.D. N.D. -1.3
nophagecontrol Time16-nophage +0.5 -0.4 N.D. N.D. -1.0
stress nitrate 100 mM +0.6 +0.3 N.D. N.D. -1.7
temperature LB 37C +0.5 +0.1 N.D. N.D. -1.3
nitrogen source nitrogen source nitrite 0.1mM +0.6 -0.6 N.D. N.D. -0.6
lb LB -0.1 +0.7 N.D. N.D. -1.1
carbon source D,L-Lactate (C) -0.6 -0.5 N.D. N.D. +0.7
carbon source D-Lactate (C) -0.9 -0.1 N.D. N.D. +0.7
stress Carbenicillin 2 mg/ml +0.4 +0.3 N.D. N.D. -0.8
denitrifying Nitrate reduction, replicate C t2 -0.5 +0.8 N.D. N.D. -0.2
carbon source carbon source Sucrose 0.25mM -0.6 -0.2 N.D. N.D. +1.1
stress Chloride 300 mM +0.8 +0.1 N.D. N.D. -0.5
denitrifying Nitrate reduction in presence of wild-type Pseudomonas N2-E2; replicate A +1.2 -0.3 N.D. N.D. -0.2
temperature LB 37C -0.1 +0.9 N.D. N.D. +0.7
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