Fitness for 5 genes in Pseudomonas fluorescens FW300-N1B4

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500 ntPf1N1B4_4520 and Pf1N1B4_4521 are separated by 2 nucleotidesPf1N1B4_4521 and Pf1N1B4_4522 are separated by 140 nucleotidesPf1N1B4_4522 and Pf1N1B4_4523 are separated by 3 nucleotidesPf1N1B4_4523 and Pf1N1B4_4524 are separated by 212 nucleotides Pf1N1B4_4520 - GENE II AND X PROTEINS, at 4,984,635 to 4,985,048 _4520 Pf1N1B4_4521 - Probable transmembrane protein, at 4,985,051 to 4,985,485 _4521 Pf1N1B4_4522 - 4-carboxymuconolactone decarboxylase domain/alkylhydroperoxidase AhpD family core domain protein, at 4,985,626 to 4,986,060 _4522 Pf1N1B4_4523 - RNA polymerase sigma-70 factor, ECF subfamily, at 4,986,064 to 4,986,957 _4523 Pf1N1B4_4524 - Sensory box transcriptional regulator, LuxR family, at 4,987,170 to 4,988,666 _4524
Group Condition Pf1N1B4_4520 Pf1N1B4_4521 Pf1N1B4_4522 Pf1N1B4_4523 Pf1N1B4_4524
carbon source carbon source Sucrose 1mM N.D. -1.9 +0.1 -1.7 N.D.
carbon source carbon source Sucrose 5mM N.D. -0.3 -0.2 -2.9 N.D.
carbon source carbon source Sucrose 5mM N.D. -1.1 -0.5 -0.9 N.D.
carbon source carbon source Sucrose 1mM N.D. -1.3 -0.7 -0.2 N.D.
stress Aluminum chloride 2.5 mM N.D. +0.7 -1.3 -1.4 N.D.
temperature LB 37C N.D. +0.5 -0.1 -2.4 N.D.
carbon source carbon source Sucrose 0.25mM N.D. -0.2 -0.1 -1.6 N.D.
carbon source carbon source Sucrose 0.5mM N.D. -0.9 +0.8 -1.7 N.D.
anaerobic N2E2wt with N1B4m denitrifying repA N.D. -0.5 +0.2 -1.3 N.D.
nitrogen source D-Glucosamine Hydrochloride (N) N.D. +0.0 +0.2 -1.7 N.D.
carbon source casaminos (C) N.D. +0.3 -0.3 -1.3 N.D.
nophagecontrol TIme6-nophage N.D. +0.5 -0.2 -1.3 N.D.
carbon source L-Malic (C) N.D. +0.6 -0.5 -1.0 N.D.
carbon source L-Asparagine (C) N.D. +0.9 -0.4 -1.5 N.D.
carbon source L-Glutamic (C) N.D. +0.7 -0.4 -1.1 N.D.
lb LB N.D. +0.6 -0.4 -1.0 N.D.
nitrogen source L-Leucine (N) N.D. +0.7 -0.3 -1.0 N.D.
carbon source D-Galacturonic Acid (C) N.D. +0.6 +0.2 -1.2 N.D.
stress Fusidic 0.0625 mg/ml N.D. +0.7 +0.3 -1.2 N.D.
carbon source L-Leucine (C) N.D. +1.0 -0.7 -0.4 N.D.
stress Dimethyl Sulfoxide 6.5 vol% N.D. +1.1 -0.4 -0.7 N.D.
pH Minimal media pH9 N.D. -0.6 +1.1 -0.3 N.D.
nitrogen source L-Valine (N) N.D. +1.3 -0.0 -0.5 N.D.
stress Chlorite 1 mM N.D. -0.6 +0.6 +1.0 N.D.
nitrogen source nitrogen source nitrate 20mM N.D. -0.4 +0.7 +0.9 N.D.
nitrogen source Uridine (N) N.D. +0.4 +0.5 +0.9 N.D.
nitrogen source Cytosine (N) N.D. +0.2 +0.6 +1.1 N.D.
lb LB N.D. +0.4 +0.8 +0.8 N.D.
stress Benzethonium chloride 0.0125 mM N.D. +0.1 +1.0 +1.2 N.D.
nitrogen source Ammonium chloride (N) N.D. +0.4 +1.1 +0.9 N.D.
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Pf1N1B4_4520
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Pf1N1B4_4524
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