Fitness for 5 genes in Pseudomonas fluorescens FW300-N1B4

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500 ntPf1N1B4_4502 and Pf1N1B4_4503 are separated by 385 nucleotidesPf1N1B4_4503 and Pf1N1B4_4504 are separated by 3 nucleotidesPf1N1B4_4504 and Pf1N1B4_4505 overlap by 23 nucleotidesPf1N1B4_4505 and Pf1N1B4_4506 are separated by 238 nucleotides Pf1N1B4_4502 - Aldehyde dehydrogenase (EC 1.2.1.3), at 4,963,641 to 4,965,161 _4502 Pf1N1B4_4503 - Coenzyme PQQ synthesis protein B, at 4,965,547 to 4,966,461 _4503 Pf1N1B4_4504 - Pyrroloquinoline-quinone synthase (EC 1.3.3.11), at 4,966,465 to 4,966,872 _4504 Pf1N1B4_4505 - Coenzyme PQQ synthesis protein E, at 4,966,850 to 4,968,487 _4505 Pf1N1B4_4506 - Alcohol dehydrogenase (EC 1.1.1.1); Acetaldehyde dehydrogenase (EC 1.2.1.10), at 4,968,726 to 4,969,889 _4506
Group Condition Pf1N1B4_4502 Pf1N1B4_4503 Pf1N1B4_4504 Pf1N1B4_4505 Pf1N1B4_4506
carbon source carbon source Sucrose 0.25mM N.D. N.D. N.D. -1.3 -1.1
carbon source carbon source Sucrose 0.25mM N.D. N.D. N.D. -0.4 -1.5
carbon source Carnitine Hydrochloride (C) N.D. N.D. N.D. -0.2 -1.7
carbon source L-Citrulline (C) N.D. N.D. N.D. +0.2 -1.8
carbon source carbon source Sucrose 5mM N.D. N.D. N.D. -1.4 -0.2
anaerobic Nitrate reduction N.D. N.D. N.D. -1.8 +0.3
carbon source Cytidine (C) N.D. N.D. N.D. +0.4 -1.8
lb LB N.D. N.D. N.D. -0.7 -0.6
nitrogen source nitrogen source nitrite 0.5mM N.D. N.D. N.D. -0.7 -0.6
anaerobic Nitrate reduction N.D. N.D. N.D. -0.4 -0.8
carbon source L-Isoleucine (C) N.D. N.D. N.D. -0.4 -0.9
stress Cephalothin 2.5 mg/ml N.D. N.D. N.D. +0.2 -1.2
stress Cisplatin 0.006 mg/ml N.D. N.D. N.D. -1.2 +0.2
carbon source Uridine (C) N.D. N.D. N.D. +0.8 -1.5
anaerobic N2E2wt with N1B4m denitrifying repB N.D. N.D. N.D. +0.6 -1.2
carbon source L-Alanine (C) N.D. N.D. N.D. +0.6 -1.1
stress Fusidic 0.125 mg/ml N.D. N.D. N.D. +0.7 -0.9
pH Minimal media pH9 N.D. N.D. N.D. +0.9 -1.0
stress nitrate 100 mM N.D. N.D. N.D. +0.6 -0.7
carbon source Putrescine (C) N.D. N.D. N.D. +0.6 -0.7
nophagecontrol Time16-nophage N.D. N.D. N.D. -0.7 +0.6
carbon source Tween 20 (C) N.D. N.D. N.D. +0.7 -0.5
carbon source D-Fructose (C) N.D. N.D. N.D. +0.9 -0.6
carbon source casaminos (C) N.D. N.D. N.D. +0.8 -0.5
carbon source D-Galacturonic Acid (C) N.D. N.D. N.D. +0.8 -0.5
carbon source carbon source Sucrose 1mM N.D. N.D. N.D. +0.2 +1.0
stress Rifampicin 0.004 mg/ml N.D. N.D. N.D. +0.8 +0.7
temperature LB 37C N.D. N.D. N.D. +0.9 +0.6
carbon source D-Ribose (C) N.D. N.D. N.D. +0.9 +0.7
carbon source carbon source Sucrose 0.5mM N.D. N.D. N.D. +0.3 +1.5
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