Fitness for 5 genes in Pseudomonas fluorescens FW300-N1B4

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500 ntPf1N1B4_447 and Pf1N1B4_448 are separated by 3 nucleotidesPf1N1B4_448 and Pf1N1B4_449 overlap by 1 nucleotidesPf1N1B4_449 and Pf1N1B4_450 are separated by 144 nucleotidesPf1N1B4_450 and Pf1N1B4_451 are separated by 191 nucleotides Pf1N1B4_447 - FIG004453: protein YceG like, at 538,996 to 540,210 _447 Pf1N1B4_448 - Aminodeoxychorismate lyase (EC 4.1.3.38), at 540,214 to 541,029 _448 Pf1N1B4_449 - 3-oxoacyl-[acyl-carrier-protein] synthase, KASII (EC 2.3.1.179), at 541,029 to 542,237 _449 Pf1N1B4_450 - Acyl carrier protein, at 542,382 to 542,618 _450 Pf1N1B4_451 - 3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100), at 542,810 to 543,553 _451
Group Condition Pf1N1B4_447 Pf1N1B4_448 Pf1N1B4_449 Pf1N1B4_450 Pf1N1B4_451
nophagecontrol TIme6-nophage +0.0 -3.4 N.D. N.D. N.D.
anaerobic Nitrate reduction -0.4 -2.0 N.D. N.D. N.D.
stress Aluminum chloride 2.5 mM +0.3 -2.7 N.D. N.D. N.D.
carbon source carbon source Sucrose 1mM +0.7 -3.0 N.D. N.D. N.D.
anaerobic N2E2wt with N1B4m denitrifying repB -0.3 -1.7 N.D. N.D. N.D.
denitrifying Denitrifying in presence of WT Pseudomonas N2-E3; replicate C; timepoint 1 -0.3 -1.6 N.D. N.D. N.D.
stress Doxycycline hyclate 0.0001 mg/ml +0.7 -2.7 N.D. N.D. N.D.
stress Carbenicillin 2 mg/ml -1.8 -0.1 N.D. N.D. N.D.
anaerobic Nitrate reduction -0.3 -1.5 N.D. N.D. N.D.
nitrogen source nitrogen source nitrate 5mM +0.1 -1.8 N.D. N.D. N.D.
denitrifying Nitrate reduction in presence of wild-type Pseudomonas N2-E2; replicate B -0.3 -1.4 N.D. N.D. N.D.
anaerobic N2E2wt with N1B4m denitrifying repA -0.4 -1.2 N.D. N.D. N.D.
denitrifying Denitrifying in presence of WT Pseudomonas N2-E3; replicate B; timepoint 1 -0.4 -1.1 N.D. N.D. N.D.
carbon source L-Leucine (C) +0.2 -1.7 N.D. N.D. N.D.
denitrifying Nitrate reduction in presence of wild-type Pseudomonas N2-E3; replicate A -0.3 -1.1 N.D. N.D. N.D.
nitrogen source nitrogen source nitrite 0.1mM -0.1 -1.3 N.D. N.D. N.D.
denitrifying Nitrate reduction, replicate A t2 -0.4 -0.9 N.D. N.D. N.D.
denitrifying Nitrate reduction, replicate C t3 -0.4 -0.8 N.D. N.D. N.D.
denitrifying Nitrate reduction, replicate A -0.5 -0.7 N.D. N.D. N.D.
carbon source L-Glutamine (C) +0.0 -1.2 N.D. N.D. N.D.
carbon source carbon source Sucrose 1mM +0.6 -1.6 N.D. N.D. N.D.
carbon source L-Arabinose (C) +0.2 -1.1 N.D. N.D. N.D.
nitrogen source L-Methionine (N) +0.5 -0.9 N.D. N.D. N.D.
stress Cisplatin 0.006 mg/ml +0.6 -0.8 N.D. N.D. N.D.
temperature LB 37C +0.1 +1.1 N.D. N.D. N.D.
nitrogen source Cytidine (N) +0.7 +0.5 N.D. N.D. N.D.
stress Chloride 300 mM +0.4 +1.0 N.D. N.D. N.D.
stress Fusidic 0.0625 mg/ml +0.9 +0.6 N.D. N.D. N.D.
stress Choline chloride 200 mM +1.3 +0.3 N.D. N.D. N.D.
stress nitrate 100 mM +0.9 +0.7 N.D. N.D. N.D.
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