Fitness for 5 genes in Pseudomonas fluorescens FW300-N1B4

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500 ntPf1N1B4_443 and Pf1N1B4_444 are separated by 1042 nucleotidesPf1N1B4_444 and Pf1N1B4_445 are separated by 2661 nucleotidesPf1N1B4_445 and Pf1N1B4_446 are separated by 536 nucleotidesPf1N1B4_446 and Pf1N1B4_447 are separated by 19 nucleotides Pf1N1B4_443 - Translation-disabling ACNase RloC, at 526,701 to 528,857 _443 Pf1N1B4_444 - [Genomic island nu Sa beta2], at 529,900 to 534,042 _444 Pf1N1B4_445 - hypothetical protein, at 536,704 to 538,047 _445 Pf1N1B4_446 - Thymidylate kinase (EC 2.7.4.9), at 538,584 to 538,976 _446 Pf1N1B4_447 - FIG004453: protein YceG like, at 538,996 to 540,210 _447
Group Condition Pf1N1B4_443 Pf1N1B4_444 Pf1N1B4_445 Pf1N1B4_446 Pf1N1B4_447
stress Carbenicillin 2 mg/ml +0.1 -0.1 -0.0 -0.1 -1.8
anaerobic Nitrate reduction -0.3 -0.2 -0.1 -0.8 -0.4
nitrogen source nitrate (N) -0.3 -0.2 -0.5 -1.0 +0.2
nitrogen source Ammonium chloride (N) -0.5 -0.2 -0.3 -0.5 +0.1
lb LB -0.4 -0.1 +0.1 -0.8 +0.2
denitrifying Denitrifying in presence of WT Pseudomonas N2-E3; replicate C; timepoint 1 -0.7 +0.2 -0.2 +0.1 -0.3
nitrogen source Cytidine (N) -0.4 -0.2 -0.3 -0.5 +0.7
carbon source carbon source Sucrose 0.25mM +0.2 -0.3 -0.1 -0.9 +0.4
carbon source octanoate (C) -0.7 -0.3 -0.1 +0.3 +0.4
carbon source carbon source Sucrose 1mM -0.4 -0.2 -0.0 -0.3 +0.7
stress Benzethonium chloride 0.0125 mM -0.3 +0.1 +0.2 -0.5 +0.6
denitrifying Nitrate reduction, replicate C +0.5 -0.1 -0.1 +0.2 -0.5
stress Nalidixic 0.004 mg/ml +0.0 -0.0 +0.0 -0.6 +0.7
carbon source carbon source Sucrose 1mM -0.6 -0.2 -0.1 +0.4 +0.6
stress Dimethyl Sulfoxide 5 vol% -0.6 +0.1 +0.3 +0.4 +0.1
carbon source Uridine (C) -0.4 -0.2 +0.1 +0.5 +0.3
stress Cisplatin 0.006 mg/ml +0.1 -0.0 -0.0 -0.6 +0.8
nitrogen source L-Methionine (N) -0.5 -0.0 -0.1 +0.8 +0.5
carbon source carbon source Sucrose 0.5mM +0.1 -0.1 -0.4 +0.4 +0.6
stress Fusidic 0.125 mg/ml -0.2 +0.1 +0.4 -0.7 +1.1
carbon source casaminos (C) -0.2 -0.0 +0.4 +0.7 +0.0
stress Doxycycline hyclate 0.0001 mg/ml -0.2 +0.0 -0.3 +0.8 +0.7
carbon source carbon source Sucrose 0.25mM -0.4 -0.0 +0.0 +1.2 +0.5
stress 1-ethyl-3-methylimidazolium chloride 80 mM -0.0 +0.2 +0.2 +0.7 +0.3
nitrogen source D-Glucosamine Hydrochloride (N) +0.1 +0.0 +0.0 +0.4 +0.9
stress methylglyoxal 0.008 vol% +0.5 +0.2 +0.2 -0.1 +0.5
stress Choline Lysine 6 mM +0.6 +0.1 +0.1 +0.1 +0.8
stress Fusidic 0.0625 mg/ml +0.3 +0.1 +0.4 +0.1 +0.9
temperature LB 37C +0.2 +0.1 +0.2 +1.1 +0.4
stress Choline chloride 200 mM +0.0 -0.0 +0.1 +0.6 +1.3
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