Fitness for 5 genes in Pseudomonas fluorescens FW300-N1B4

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500 ntPf1N1B4_4144 and Pf1N1B4_4145 are separated by 1483 nucleotidesPf1N1B4_4145 and Pf1N1B4_4146 are separated by 27 nucleotidesPf1N1B4_4146 and Pf1N1B4_4147 are separated by 1209 nucleotidesPf1N1B4_4147 and Pf1N1B4_4148 are separated by 150 nucleotides Pf1N1B4_4144 - Mobile element protein, at 4,589,228 to 4,589,341 _4144 Pf1N1B4_4145 - hypothetical protein, at 4,590,825 to 4,590,992 _4145 Pf1N1B4_4146 - Transposase, at 4,591,020 to 4,591,148 _4146 Pf1N1B4_4147 - hypothetical protein, at 4,592,358 to 4,592,471 _4147 Pf1N1B4_4148 - hypothetical protein, at 4,592,622 to 4,592,738 _4148
Group Condition Pf1N1B4_4144 Pf1N1B4_4145 Pf1N1B4_4146 Pf1N1B4_4147 Pf1N1B4_4148
anaerobic Nitrate reduction N.D. -2.0 N.D. N.D. N.D.
temperature LB 37C N.D. -1.3 N.D. N.D. N.D.
carbon source carbon source Sucrose 20mM N.D. -1.1 N.D. N.D. N.D.
stress Spectinomycin 0.05 mg/ml N.D. -1.0 N.D. N.D. N.D.
nitrogen source nitrogen source nitrate 20mM N.D. -0.9 N.D. N.D. N.D.
denitrifying Nitrate reduction, replicate B N.D. -0.9 N.D. N.D. N.D.
anaerobic N2E2wt with N1B4m denitrifying repA N.D. -0.9 N.D. N.D. N.D.
carbon source D-Glucose (C) N.D. -0.8 N.D. N.D. N.D.
stress Bacitracin 2 mg/ml N.D. -0.8 N.D. N.D. N.D.
carbon source Fumarate (C) N.D. -0.7 N.D. N.D. N.D.
carbon source a-Ketoglutaric (C) N.D. -0.7 N.D. N.D. N.D.
carbon source acetate (C) N.D. -0.7 N.D. N.D. N.D.
nitrogen source Thymine (N) N.D. +0.7 N.D. N.D. N.D.
nitrogen source Ammonium chloride (N) N.D. +0.7 N.D. N.D. N.D.
carbon source Putrescine (C) N.D. +0.7 N.D. N.D. N.D.
nitrogen source nitrogen source Ammonium chloride 20mM N.D. +0.7 N.D. N.D. N.D.
carbon source L-Alanine (C) N.D. +0.7 N.D. N.D. N.D.
carbon source L-Asparagine (C) N.D. +0.8 N.D. N.D. N.D.
nitrogen source L-Isoleucine (N) N.D. +0.8 N.D. N.D. N.D.
stress Cholin acetate 10 mM N.D. +0.8 N.D. N.D. N.D.
denitrifying Nitrate reduction in presence of wild-type Pseudomonas N2-E2; replicate A N.D. +0.8 N.D. N.D. N.D.
nitrogen source Putrescine (N) N.D. +0.8 N.D. N.D. N.D.
stress Chloride 200 mM N.D. +0.9 N.D. N.D. N.D.
nitrogen source L-Citrulline (N) N.D. +0.9 N.D. N.D. N.D.
carbon source D-Galacturonic Acid (C) N.D. +0.9 N.D. N.D. N.D.
denitrifying Nitrate reduction, replicate A t1 N.D. +0.9 N.D. N.D. N.D.
carbon source D-Trehalose (C) N.D. +1.0 N.D. N.D. N.D.
denitrifying Nitrate reduction, replicate A t2 N.D. +1.1 N.D. N.D. N.D.
denitrifying Nitrate reduction, replicate C t1 N.D. +1.7 N.D. N.D. N.D.
nitrogen source Adenine (N) N.D. +1.7 N.D. N.D. N.D.
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