Fitness for 5 genes in Pseudomonas fluorescens FW300-N1B4

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 191 experiments or choose conditions or try the comparative fitness browser

500 ntPf1N1B4_4087 and Pf1N1B4_4088 are separated by 122 nucleotidesPf1N1B4_4088 and Pf1N1B4_4089 are separated by 400 nucleotidesPf1N1B4_4089 and Pf1N1B4_4090 are separated by 646 nucleotidesPf1N1B4_4090 and Pf1N1B4_4091 are separated by 111 nucleotides Pf1N1B4_4087 - MISCELLANEOUS; Unknown, at 4,535,699 to 4,536,073 _4087 Pf1N1B4_4088 - MISCELLANEOUS; Unknown, at 4,536,196 to 4,536,567 _4088 Pf1N1B4_4089 - hypothetical protein, at 4,536,968 to 4,537,324 _4089 Pf1N1B4_4090 - Exoenzymes regulatory protein AepA in lipid-linked oligosaccharide synthesis cluster, at 4,537,971 to 4,539,713 _4090 Pf1N1B4_4091 - Probable signal peptide protein, at 4,539,825 to 4,540,565 _4091
Group Condition Pf1N1B4_4087 Pf1N1B4_4088 Pf1N1B4_4089 Pf1N1B4_4090 Pf1N1B4_4091
carbon source carbon source Sucrose 0.25mM -2.3 N.D. -0.4 -0.1 -0.9
pH Minimal media pH9 -2.2 N.D. -0.8 +0.4 +0.5
carbon source carbon source Sucrose 0.25mM -0.8 N.D. +0.2 -0.3 -0.6
nitrogen source L-Methionine (N) -0.7 N.D. -0.6 -0.1 +0.1
temperature LB 37C -0.4 N.D. +0.7 -0.3 -1.4
stress Cholin acetate 20 mM -1.0 N.D. +0.2 -0.0 -0.4
anaerobic N2E2wt with N1B4m denitrifying repA -0.5 N.D. +0.1 +0.2 -0.7
stress Benzethonium chloride 0.0125 mM -0.1 N.D. -1.2 +0.1 +0.3
temperature LB 37C +0.3 N.D. +0.4 -0.5 -0.8
carbon source carbon source Sucrose 0.5mM +0.6 N.D. +0.1 +0.0 -1.2
survival 4C survival; 24 hrs -0.7 N.D. -0.2 +0.2 +0.3
stress Rifampicin 0.004 mg/ml +0.5 N.D. -0.6 +0.1 -0.3
carbon source carbon source Sucrose 5mM -0.3 N.D. -0.5 +0.4 +0.4
nitrogen source L-Isoleucine (N) -0.1 N.D. -0.5 +0.3 +0.5
nitrogen source Thymine (N) -0.7 N.D. +1.0 -0.2 +0.4
stress Cephalothin 2.5 mg/ml +1.0 N.D. -0.3 -0.1 -0.1
nitrogen source Ammonium chloride (N) -0.4 N.D. +0.9 -0.1 +0.3
carbon source L-Leucine (C) +0.4 N.D. -0.4 +0.4 +0.3
carbon source D-Alanine (C) +0.4 N.D. -0.5 +0.2 +0.6
stress Dimethyl Sulfoxide 5 vol% +0.9 N.D. -0.5 +0.2 +0.3
carbon source D-Trehalose (C) +0.8 N.D. -0.5 +0.3 +0.3
carbon source L-Glutamine (C) +1.0 N.D. -0.3 -0.0 +0.4
carbon source Putrescine (C) +0.8 N.D. -0.2 +0.2 +0.3
denitrifying Nitrate reduction, replicate C t1 +0.5 N.D. +0.2 -0.2 +0.7
stress D-Cycloserine 0.1 mg/ml +0.5 N.D. -0.2 +0.2 +0.8
nitrogen source Cytosine (N) +0.1 N.D. +1.0 -0.1 +0.3
carbon source casaminos (C) +0.6 N.D. -0.1 +0.2 +0.7
nitrogen source L-Citrulline (N) +0.8 N.D. +0.1 +0.3 +0.2
carbon source L-Isoleucine (C) +0.8 N.D. +0.2 +0.0 +0.5
carbon source Tween 20 (C) +0.7 N.D. +0.2 +0.0 +0.7
remove
Pf1N1B4_4087
plot
remove
Pf1N1B4_4088
plot
remove
Pf1N1B4_4089
remove
Pf1N1B4_4090
plot
remove
Pf1N1B4_4091
plot