Fitness for 5 genes in Pseudomonas fluorescens FW300-N1B4

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500 ntPf1N1B4_4085 and Pf1N1B4_4086 are separated by 135 nucleotidesPf1N1B4_4086 and Pf1N1B4_4087 are separated by 65 nucleotidesPf1N1B4_4087 and Pf1N1B4_4088 are separated by 122 nucleotidesPf1N1B4_4088 and Pf1N1B4_4089 are separated by 400 nucleotides Pf1N1B4_4085 - probable exported protein YPO0702, at 4,533,444 to 4,534,475 _4085 Pf1N1B4_4086 - transcriptional regulator, LuxR family, at 4,534,611 to 4,535,633 _4086 Pf1N1B4_4087 - MISCELLANEOUS; Unknown, at 4,535,699 to 4,536,073 _4087 Pf1N1B4_4088 - MISCELLANEOUS; Unknown, at 4,536,196 to 4,536,567 _4088 Pf1N1B4_4089 - hypothetical protein, at 4,536,968 to 4,537,324 _4089
Group Condition Pf1N1B4_4085 Pf1N1B4_4086 Pf1N1B4_4087 Pf1N1B4_4088 Pf1N1B4_4089
carbon source carbon source Sucrose 0.25mM -0.2 -0.4 -2.3 N.D. -0.4
pH Minimal media pH9 +0.1 +0.0 -2.2 N.D. -0.8
carbon source carbon source Sucrose 0.25mM -0.7 -0.7 -0.8 N.D. +0.2
carbon source carbon source Sucrose 5mM -0.3 -0.5 -0.3 N.D. -0.5
stress Cholin acetate 20 mM -0.3 -0.2 -1.0 N.D. +0.2
stress Chlorite 1 mM +0.2 -0.4 -0.6 N.D. -0.4
nitrogen source L-Methionine (N) -0.1 +0.5 -0.7 N.D. -0.6
stress Doxycycline hyclate 0.0001 mg/ml +0.1 -0.8 -0.5 N.D. +0.2
stress Chloride 200 mM -0.2 -0.6 +0.5 N.D. -0.5
carbon source carbon source Sucrose 1mM -0.7 +0.1 +0.4 N.D. -0.5
stress Benzethonium chloride 0.0125 mM +0.4 +0.2 -0.1 N.D. -1.2
nitrogen source nitrogen source nitrate 5mM -0.3 -0.3 +0.6 N.D. -0.5
phagefrs Time16-FRS -0.5 -0.5 +0.4 N.D. +0.1
stress Rifampicin 0.004 mg/ml +0.3 -0.5 +0.5 N.D. -0.6
carbon source carbon source Sucrose 5mM +0.0 -0.7 +0.7 N.D. +0.0
carbon source carbon source Sucrose 1mM -0.5 +0.5 -0.2 N.D. +0.3
nitrogen source Ammonium chloride (N) +0.0 -0.3 -0.4 N.D. +0.9
denitrifying Nitrate reduction, replicate B +0.6 +0.4 +0.2 N.D. -0.9
carbon source L-Glutamine (C) -0.3 +0.0 +1.0 N.D. -0.3
stress Cephalothin 2.5 mg/ml -0.1 -0.1 +1.0 N.D. -0.3
temperature LB 37C +0.8 -0.6 -0.4 N.D. +0.7
carbon source D-Fructose (C) +0.4 +0.0 -0.5 N.D. +0.7
nitrogen source Thymine (N) +0.4 +0.0 -0.7 N.D. +1.0
stress Dimethyl Sulfoxide 5 vol% +0.2 +0.2 +0.9 N.D. -0.5
nitrogen source Carnitine Hydrochloride (N) -0.3 +0.4 +0.7 N.D. +0.2
carbon source Putrescine (C) -0.1 +0.6 +0.8 N.D. -0.2
nitrogen source Cytosine (N) +0.3 -0.1 +0.1 N.D. +1.0
carbon source L-Lactate (C) +0.4 +0.4 +0.3 N.D. +0.4
carbon source D-Lactate (C) +0.4 +0.3 +0.3 N.D. +0.6
carbon source pyruvate (C) +0.1 +0.4 +0.4 N.D. +0.8
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