Fitness for 5 genes in Pseudomonas fluorescens FW300-N1B4

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500 ntPf1N1B4_4059 and Pf1N1B4_4060 are separated by 306 nucleotidesPf1N1B4_4060 and Pf1N1B4_4061 are separated by 68 nucleotidesPf1N1B4_4061 and Pf1N1B4_4062 are separated by 172 nucleotidesPf1N1B4_4062 and Pf1N1B4_4063 overlap by 1 nucleotides Pf1N1B4_4059 - Thioredoxin reductase (EC 1.8.1.9), at 4,511,761 to 4,512,720 _4059 Pf1N1B4_4060 - Cell division protein FtsK, at 4,513,027 to 4,515,432 _4060 Pf1N1B4_4061 - Outer membrane lipoprotein carrier protein LolA, at 4,515,501 to 4,516,124 _4061 Pf1N1B4_4062 - FIG065221: Holliday junction DNA helicase, at 4,516,297 to 4,517,619 _4062 Pf1N1B4_4063 - CrcB protein, at 4,517,619 to 4,517,993 _4063
Group Condition Pf1N1B4_4059 Pf1N1B4_4060 Pf1N1B4_4061 Pf1N1B4_4062 Pf1N1B4_4063
stress sodium fluoride 12.5 mM +1.4 N.D. N.D. -2.0 -3.6
stress sodium fluoride 12.5 mM +1.7 N.D. N.D. -1.5 -3.9
stress methylglyoxal 0.008 vol% -0.3 N.D. N.D. -1.8 +0.0
stress Choline chloride 200 mM -0.4 N.D. N.D. -1.0 -0.4
stress Doxycycline hyclate 0.0001 mg/ml -0.3 N.D. N.D. +0.0 -1.4
stress Carbenicillin 2 mg/ml -0.8 N.D. N.D. -0.6 -0.2
carbon source carbon source Sucrose 1mM -0.1 N.D. N.D. -1.1 -0.3
nitrogen source nitrogen source nitrite 0.1mM -0.7 N.D. N.D. -0.3 -0.3
stress Spectinomycin 0.05 mg/ml -0.2 N.D. N.D. -0.0 -1.1
nitrogen source Adenine (N) -0.4 N.D. N.D. -0.2 -0.6
nitrogen source nitrogen source nitrite 0.5mM -0.4 N.D. N.D. -0.6 -0.2
stress nitrate 100 mM -0.6 N.D. N.D. -0.5 -0.0
nitrogen source nitrogen source nitrate 20mM -0.6 N.D. N.D. -0.4 -0.2
carbon source carbon source Sucrose 5mM -0.1 N.D. N.D. -0.3 -0.8
nitrogen source L-Histidine (N) +0.1 N.D. N.D. -0.3 -0.8
temperature LB 37C +0.2 N.D. N.D. -0.6 -0.5
stress Benzethonium chloride 0.0125 mM -0.5 N.D. N.D. +0.3 -0.7
carbon source carbon source Sucrose 0.5mM -0.6 N.D. N.D. -0.5 +0.2
stress methylglyoxal 0.004 vol% -0.1 N.D. N.D. -1.0 +0.2
carbon source D-Lactate (C) +0.3 N.D. N.D. -0.2 -0.7
temperature LB 37C +0.6 N.D. N.D. -1.0 -0.1
anaerobic Nitrate reduction +0.6 N.D. N.D. +0.0 -1.2
denitrifying Nitrate reduction, replicate B t2 -0.3 N.D. N.D. -0.5 +0.4
nitrogen source Ammonium chloride (N) -0.3 N.D. N.D. -0.4 +0.5
lb LB -0.4 N.D. N.D. -0.3 +0.6
stress nitrite 10 mM -0.5 N.D. N.D. -0.2 +0.5
nitrogen source D-Glucosamine Hydrochloride (N) +0.3 N.D. N.D. -0.5 +0.4
anaerobic N2E2wt with N1B4m denitrifying repA +0.6 N.D. N.D. +0.1 -0.5
stress Cobalt chloride 0.3125 mM +0.6 N.D. N.D. +0.2 -0.2
denitrifying Nitrate reduction, replicate B +0.2 N.D. N.D. +0.2 +0.7
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