Fitness for 5 genes in Pseudomonas fluorescens FW300-N1B4

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500 ntPf1N1B4_4044 and Pf1N1B4_4045 overlap by 8 nucleotidesPf1N1B4_4045 and Pf1N1B4_4046 are separated by 86 nucleotidesPf1N1B4_4046 and Pf1N1B4_4047 are separated by 127 nucleotidesPf1N1B4_4047 and Pf1N1B4_4048 overlap by 4 nucleotides Pf1N1B4_4044 - GNAT family acetyltransferase YjcF, at 4,496,664 to 4,497,089 _4044 Pf1N1B4_4045 - FIG002776: hypothetical protein, at 4,497,082 to 4,498,251 _4045 Pf1N1B4_4046 - Adenylosuccinate lyase (EC 4.3.2.2), at 4,498,338 to 4,499,708 _4046 Pf1N1B4_4047 - FIG002903: a protein of unknown function perhaps involved in purine metabolism, at 4,499,836 to 4,500,459 _4047 Pf1N1B4_4048 - tRNA-specific 2-thiouridylase MnmA, at 4,500,456 to 4,501,589 _4048
Group Condition Pf1N1B4_4044 Pf1N1B4_4045 Pf1N1B4_4046 Pf1N1B4_4047 Pf1N1B4_4048
denitrifying Nitrate reduction, replicate A N.D. N.D. N.D. -1.0 N.D.
denitrifying Nitrate reduction, replicate C N.D. N.D. N.D. -0.9 N.D.
denitrifying Nitrate reduction, replicate B N.D. N.D. N.D. -0.7 N.D.
anaerobic Nitrate reduction N.D. N.D. N.D. -0.6 N.D.
denitrifying Nitrate reduction, replicate B t2 N.D. N.D. N.D. -0.5 N.D.
stress 1-ethyl-3-methylimidazolium lysine 5 mM N.D. N.D. N.D. -0.5 N.D.
denitrifying Nitrate reduction, replicate A t1 N.D. N.D. N.D. -0.5 N.D.
stress nitrite 10 mM N.D. N.D. N.D. -0.5 N.D.
stress Choline Lysine 6 mM N.D. N.D. N.D. -0.4 N.D.
carbon source L-Arabinose (C) N.D. N.D. N.D. -0.4 N.D.
carbon source D-Galacturonic Acid (C) N.D. N.D. N.D. +0.4 N.D.
stress Fusidic 0.0625 mg/ml N.D. N.D. N.D. +0.4 N.D.
nitrogen source nitrogen source nitrate 20mM N.D. N.D. N.D. +0.4 N.D.
nitrogen source nitrogen source Ammonium chloride 20mM N.D. N.D. N.D. +0.4 N.D.
nitrogen source Uridine (N) N.D. N.D. N.D. +0.4 N.D.
carbon source D-Mannose (C) N.D. N.D. N.D. +0.4 N.D.
temperature LB 37C N.D. N.D. N.D. +0.4 N.D.
stress Choline chloride 200 mM N.D. N.D. N.D. +0.4 N.D.
stress Chlorite 1 mM N.D. N.D. N.D. +0.5 N.D.
stress copper (II) chloride 2.5 mM N.D. N.D. N.D. +0.5 N.D.
nitrogen source nitrogen source nitrite 1mM N.D. N.D. N.D. +0.5 N.D.
carbon source Cytidine (C) N.D. N.D. N.D. +0.5 N.D.
carbon source L-Valine (C) N.D. N.D. N.D. +0.5 N.D.
carbon source L-Leucine (C) N.D. N.D. N.D. +0.6 N.D.
carbon source carbon source Sucrose 5mM N.D. N.D. N.D. +0.6 N.D.
stress sodium fluoride 12.5 mM N.D. N.D. N.D. +0.6 N.D.
stress sodium fluoride 12.5 mM N.D. N.D. N.D. +0.6 N.D.
carbon source carbon source Sucrose 0.25mM N.D. N.D. N.D. +0.7 N.D.
carbon source carbon source Sucrose 1mM N.D. N.D. N.D. +0.7 N.D.
stress Doxycycline hyclate 0.0001 mg/ml N.D. N.D. N.D. +0.8 N.D.
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