Fitness for 5 genes in Pseudomonas fluorescens FW300-N1B4

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500 ntPf1N1B4_4037 and Pf1N1B4_4038 overlap by 4 nucleotidesPf1N1B4_4038 and Pf1N1B4_4039 are separated by 2 nucleotidesPf1N1B4_4039 and Pf1N1B4_4040 are separated by 72 nucleotidesPf1N1B4_4040 and Pf1N1B4_4041 are separated by 10 nucleotides Pf1N1B4_4037 - NADH-ubiquinone oxidoreductase chain F (EC 1.6.5.3), at 4,488,385 to 4,489,740 _4037 Pf1N1B4_4038 - NADH-ubiquinone oxidoreductase chain E (EC 1.6.5.3), at 4,489,737 to 4,490,234 _4038 Pf1N1B4_4039 - NADH-ubiquinone oxidoreductase chain C (EC 1.6.5.3) / NADH-ubiquinone oxidoreductase chain D (EC 1.6.5.3), at 4,490,237 to 4,492,021 _4039 Pf1N1B4_4040 - NADH-ubiquinone oxidoreductase chain B (EC 1.6.5.3), at 4,492,094 to 4,492,768 _4040 Pf1N1B4_4041 - NADH ubiquinone oxidoreductase chain A (EC 1.6.5.3), at 4,492,779 to 4,493,192 _4041
Group Condition Pf1N1B4_4037 Pf1N1B4_4038 Pf1N1B4_4039 Pf1N1B4_4040 Pf1N1B4_4041
carbon source carbon source Sucrose 1mM N.D. -3.9 -2.6 -4.4 -3.7
carbon source carbon source Sucrose 1mM N.D. -4.2 -2.5 -3.1 -4.2
carbon source carbon source Sucrose 20mM N.D. -4.3 -3.0 -2.6 -3.0
carbon source carbon source Sucrose 5mM N.D. -4.6 -3.4 -2.8 -1.8
carbon source carbon source Sucrose 0.25mM N.D. -3.6 -1.7 -2.5 -4.7
carbon source carbon source Sucrose 5mM N.D. -4.4 -3.6 -1.9 -2.3
carbon source carbon source Sucrose 0.5mM N.D. -3.1 -3.2 -1.5 -4.1
carbon source carbon source Sucrose 20mM N.D. -2.3 -3.2 -4.2 -1.6
nitrogen source nitrogen source nitrite 1mM N.D. -3.3 -2.3 -2.7 -2.4
nitrogen source nitrogen source nitrite 0.5mM N.D. -2.8 -1.3 -4.1 -2.3
nitrogen source nitrogen source Ammonium chloride 20mM N.D. -3.2 -2.2 -2.5 -2.5
nitrogen source nitrogen source nitrate 20mM N.D. -2.7 -1.9 -2.6 -2.6
nitrogen source nitrogen source nitrite 0.5mM N.D. -3.9 -1.6 -1.4 -2.7
carbon source octanoate (C) N.D. -3.5 -2.2 -1.4 -2.4
nitrogen source nitrogen source nitrate 20mM N.D. -3.0 -1.9 -2.1 -2.0
nitrogen source L-Serine (N) N.D. -3.5 -1.7 -2.5 -1.1
nitrogen source nitrogen source Ammonium chloride 20mM N.D. -3.2 -1.8 -1.8 -1.9
stress nitrite 10 mM N.D. -3.5 -2.1 -1.5 -1.5
nitrogen source nitrogen source nitrite 1mM N.D. -2.3 -2.2 -2.0 -1.9
carbon source carbon source Sucrose 0.25mM N.D. -4.0 -1.8 +0.1 -2.7
carbon source L-Arginine (C) N.D. -2.1 -2.1 -1.9 -2.1
nitrogen source nitrogen source nitrite 0.1mM N.D. -4.5 -0.8 -0.4 -2.0
carbon source L-Citrulline (C) N.D. -2.4 -2.1 -1.7 -1.5
carbon source L-Leucine (C) N.D. -1.8 -2.5 -1.8 -1.5
stress nitrite 10 mM N.D. -1.8 -1.8 -2.4 -1.6
stress Cholin acetate 20 mM N.D. -2.5 -1.4 -1.4 -2.1
carbon source Carnitine Hydrochloride (C) N.D. -2.5 -2.0 -1.7 -1.1
pH Minimal media pH9 N.D. +2.7 +2.0 +1.7 +1.8
pH Minimal media pH9 N.D. +2.5 +2.1 +2.1 +1.6
stress Doxycycline hyclate 0.0001 mg/ml N.D. +2.7 +2.2 +2.3 +2.6
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