Fitness for 5 genes in Pseudomonas fluorescens FW300-N1B4

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500 ntPf1N1B4_3936 and Pf1N1B4_3937 are separated by 181 nucleotidesPf1N1B4_3937 and Pf1N1B4_3938 are separated by 28 nucleotidesPf1N1B4_3938 and Pf1N1B4_3939 are separated by 79 nucleotidesPf1N1B4_3939 and Pf1N1B4_3940 are separated by 171 nucleotides Pf1N1B4_3936 - Transcriptional regulator, LysR family, at 4,373,369 to 4,374,268 _3936 Pf1N1B4_3937 - Membrane protein involved in colicin uptake, at 4,374,450 to 4,374,692 _3937 Pf1N1B4_3938 - Integral membrane protein TerC, at 4,374,721 to 4,375,470 _3938 Pf1N1B4_3939 - FIG00953489: hypothetical protein, at 4,375,550 to 4,375,720 _3939 Pf1N1B4_3940 - Glutamate synthase [NADPH] large chain (EC 1.4.1.13), at 4,375,892 to 4,376,620 _3940
Group Condition Pf1N1B4_3936 Pf1N1B4_3937 Pf1N1B4_3938 Pf1N1B4_3939 Pf1N1B4_3940
carbon source carbon source Sucrose 0.25mM -0.9 N.D. -0.5 -1.3 N.D.
carbon source carbon source Sucrose 5mM -1.7 N.D. +0.3 -0.7 N.D.
temperature LB 37C -0.5 N.D. -1.1 -0.4 N.D.
pH Minimal media pH9 -1.3 N.D. -0.6 +0.1 N.D.
anaerobic Nitrate reduction -1.3 N.D. +0.5 -0.7 N.D.
nitrogen source nitrogen source nitrate 20mM -1.1 N.D. -0.4 -0.1 N.D.
pH Minimal media pH6 -0.4 N.D. -0.4 -0.7 N.D.
temperature LB 10C -0.6 N.D. -0.4 -0.5 N.D.
nitrogen source D-Glucosamine Hydrochloride (N) -0.0 N.D. -1.0 -0.5 N.D.
carbon source a-Ketoglutaric (C) +0.1 N.D. -0.9 -0.7 N.D.
stress Fusidic 0.125 mg/ml -0.7 N.D. +0.0 -0.7 N.D.
stress Fusidic 0.0625 mg/ml -1.5 N.D. +0.5 -0.2 N.D.
lb LB -1.3 N.D. +0.4 -0.1 N.D.
carbon source L-Arabinose (C) +0.7 N.D. -0.9 -0.8 N.D.
carbon source D-Galactose (C) +0.4 N.D. -0.3 -0.9 N.D.
stress copper (II) chloride 2.5 mM +0.4 N.D. -0.6 -0.5 N.D.
nitrogen source D-Alanine (N) -0.6 N.D. +0.5 -0.3 N.D.
carbon source carbon source Sucrose 1mM -0.6 N.D. -0.6 +0.8 N.D.
carbon source carbon source Sucrose 0.25mM -0.6 N.D. +0.7 -0.5 N.D.
stress Bacitracin 2 mg/ml +0.6 N.D. -0.7 -0.2 N.D.
stress Doxycycline hyclate 0.0001 mg/ml +0.7 N.D. +0.3 -1.3 N.D.
carbon source D-Glucose (C) +0.4 N.D. +0.4 -0.9 N.D.
stress benzoic 0.58 mg/ml +0.4 N.D. +0.2 -0.8 N.D.
carbon source Putrescine (C) -0.6 N.D. +0.5 +0.3 N.D.
carbon source L-Arabinose (C) +1.1 N.D. -0.1 -0.7 N.D.
nitrogen source Uridine (N) +0.5 N.D. +0.8 -0.6 N.D.
nitrogen source nitrogen source nitrite 1mM +0.6 N.D. +0.5 -0.5 N.D.
carbon source acetate (C) +0.9 N.D. +0.3 -0.3 N.D.
stress Tetracycline 0.0004 mg/ml +0.9 N.D. -0.2 +0.5 N.D.
carbon source pyruvate (C) +0.9 N.D. +0.5 -0.2 N.D.
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