Fitness for 5 genes in Pseudomonas fluorescens FW300-N1B4

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500 ntPf1N1B4_384 and Pf1N1B4_385 are separated by 158 nucleotidesPf1N1B4_385 and Pf1N1B4_386 are separated by 87 nucleotidesPf1N1B4_386 and Pf1N1B4_387 overlap by 24 nucleotidesPf1N1B4_387 and Pf1N1B4_388 are separated by 120 nucleotides Pf1N1B4_384 - proteinase inhibitor, at 454,198 to 454,452 _384 Pf1N1B4_385 - Translation initiation factor 2 (IF-2; GTPase), at 454,611 to 455,078 _385 Pf1N1B4_386 - Transcriptional regulator, GntR family domain / Aspartate aminotransferase (EC 2.6.1.1), at 455,166 to 456,605 _386 Pf1N1B4_387 - hypothetical protein, at 456,582 to 456,695 _387 Pf1N1B4_388 - OmpA family protein, at 456,816 to 457,628 _388
Group Condition Pf1N1B4_384 Pf1N1B4_385 Pf1N1B4_386 Pf1N1B4_387 Pf1N1B4_388
stress Doxycycline hyclate 0.0001 mg/ml -1.1 N.D. -0.3 +0.3 -3.0
stress Nalidixic 0.004 mg/ml -1.0 N.D. +0.0 -0.1 -1.7
stress Fusidic 0.125 mg/ml -0.1 N.D. -0.1 -1.0 -1.6
nitrogen source Cytidine (N) -1.4 N.D. -0.1 -0.7 -0.0
stress methylglyoxal 0.008 vol% -1.6 N.D. +0.2 +0.3 -1.0
anaerobic Nitrate reduction -1.0 N.D. -0.0 -0.9 -0.0
stress Rifampicin 0.004 mg/ml -0.4 N.D. -0.0 +0.5 -2.0
stress Tetracycline 0.0004 mg/ml -0.5 N.D. +0.0 -0.6 -0.7
stress Benzethonium chloride 0.0125 mM -0.0 N.D. +0.1 +0.3 -2.1
stress Fusidic 0.0625 mg/ml +0.5 N.D. +0.0 -0.1 -1.9
carbon source carbon source Sucrose 0.5mM -2.2 N.D. +0.1 +0.3 +0.3
nitrogen source L-Serine (N) +0.5 N.D. -1.2 -0.9 +0.3
carbon source carbon source Sucrose 5mM -1.5 N.D. +0.0 +0.8 -0.2
stress Thallium(I) acetate 0.008 mg/ml -1.4 N.D. -0.0 +0.4 +0.5
pH Minimal media pH9 -1.4 N.D. +0.1 +0.2 +0.7
carbon source Fumarate (C) -1.0 N.D. -0.2 +0.6 +0.1
carbon source carbon source Sucrose 0.25mM -1.3 N.D. -0.2 +0.9 +0.4
carbon source acetate (C) -1.0 N.D. +0.3 +0.6 -0.1
denitrifying Nitrate reduction, replicate C t3 -0.6 N.D. -0.4 +0.1 +1.0
denitrifying Nitrate reduction, replicate C t1 +0.2 N.D. -0.3 -0.6 +0.8
nitrogen source nitrogen source nitrite 0.1mM +1.2 N.D. -0.3 -0.4 -0.1
stress Sisomicin 0.001 mg/ml -0.9 N.D. +0.6 -0.1 +0.8
carbon source m-Inositol (C) -1.2 N.D. +0.5 +0.9 +0.4
stress Aluminum chloride 2.5 mM +0.9 N.D. +0.4 -0.5 +0.4
denitrifying Nitrate reduction, replicate B t1 +0.5 N.D. -0.3 -0.0 +1.1
stress Cobalt chloride 0.3125 mM -0.2 N.D. +0.9 +1.3 -0.3
nitrogen source L-Leucine (N) -0.6 N.D. +1.3 +1.0 +0.0
carbon source L-Leucine (C) -0.3 N.D. +1.2 +1.0 +0.5
pH Minimal media pH9 +0.4 N.D. +0.2 +0.8 +1.0
stress Carbenicillin 2 mg/ml -0.2 N.D. +0.4 +0.3 +2.3
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