Fitness for 5 genes in Pseudomonas fluorescens FW300-N1B4

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 191 experiments or choose conditions or try the comparative fitness browser

500 ntPf1N1B4_3793 and Pf1N1B4_3794 overlap by 2 nucleotidesPf1N1B4_3794 and Pf1N1B4_3795 are separated by 477 nucleotidesPf1N1B4_3795 and Pf1N1B4_3796 are separated by 24 nucleotidesPf1N1B4_3796 and Pf1N1B4_3797 are separated by 107 nucleotides Pf1N1B4_3793 - COG2010: Cytochrome c, mono- and diheme variants, at 4,201,328 to 4,202,149 _3793 Pf1N1B4_3794 - hypothetical protein, at 4,202,148 to 4,202,318 _3794 Pf1N1B4_3795 - 3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9), at 4,202,796 to 4,204,001 _3795 Pf1N1B4_3796 - Enoyl-CoA hydratase [isoleucine degradation] (EC 4.2.1.17) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) / 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3), at 4,204,026 to 4,206,170 _3796 Pf1N1B4_3797 - Para-aminobenzoate synthase, amidotransferase component (EC 2.6.1.85), at 4,206,278 to 4,207,012 _3797
Group Condition Pf1N1B4_3793 Pf1N1B4_3794 Pf1N1B4_3795 Pf1N1B4_3796 Pf1N1B4_3797
carbon source carbon source Sucrose 0.25mM -0.4 -0.9 -2.0 -1.4 -0.4
anaerobic Nitrate reduction -1.0 +0.2 -1.4 +0.0 -0.5
nitrogen source Uridine (N) -0.3 +0.2 -1.5 -0.4 -0.1
carbon source carbon source Sucrose 0.25mM +0.1 -1.1 -0.7 -0.8 +0.5
stress Benzethonium chloride 0.0125 mM +0.5 +0.2 -1.7 -0.8 -0.0
stress 1-ethyl-3-methylimidazolium lysine 5 mM -0.8 +0.1 -0.9 -0.3 +0.2
nitrogen source Cytidine (N) -0.8 -0.5 -0.5 -0.1 +0.2
stress Spectinomycin 0.025 mg/ml +0.3 -0.5 -1.7 +0.0 +0.2
stress Chloride 200 mM -1.2 +0.2 -0.2 -0.4 +0.2
stress Tetracycline 0.0004 mg/ml +0.5 -0.1 -0.9 -0.3 -0.3
carbon source Fumarate (C) -0.4 +0.6 -1.2 +0.2 -0.5
carbon source D,L-Lactate (C) -0.3 +0.6 -1.2 +0.0 -0.1
nitrogen source nitrogen source nitrate 5mM +0.2 -1.2 +0.3 -0.4 +0.1
stress nitrite 10 mM +0.2 +0.6 -0.3 -0.3 -0.9
lb LB -0.3 +0.6 -0.7 -0.3 +0.5
stress Doxycycline hyclate 0.0001 mg/ml +0.3 -0.6 -0.2 -0.6 +0.8
stress D-Cycloserine 0.1 mg/ml -0.3 -0.7 +0.8 +0.2 -0.2
denitrifying Nitrate reduction, replicate B t2 +1.0 +0.5 -0.4 -0.1 -0.5
denitrifying Nitrate reduction, replicate A +0.6 +0.8 -0.6 -0.2 -0.2
carbon source D-Glucose (C) +0.6 +0.8 -0.6 -0.1 -0.2
temperature LB 37C +0.4 +0.7 -0.4 -0.3 +0.3
pH Minimal media pH9 +0.8 +0.4 -0.8 +0.1 +0.4
carbon source carbon source Sucrose 1mM -0.3 -0.7 +0.8 +0.3 +0.9
carbon source Tween 20 (C) +0.5 +0.4 +0.9 +0.0 -0.6
lb LB -0.4 +0.8 +0.7 -0.1 +0.2
carbon source carbon source Sucrose 0.5mM -0.9 +0.1 +1.4 +0.3 +0.5
nitrogen source L-Leucine (N) -0.2 +0.7 +0.9 +0.4 -0.2
carbon source L-Isoleucine (C) +0.0 +1.1 +0.5 +0.3 -0.3
carbon source L-Asparagine (C) +0.1 +0.7 +1.0 +0.3 +0.1
stress Fusidic 0.125 mg/ml +0.3 +0.9 +1.5 +0.5 +0.1
remove
Pf1N1B4_3793
plot
remove
Pf1N1B4_3794
plot
remove
Pf1N1B4_3795
remove
Pf1N1B4_3796
plot
remove
Pf1N1B4_3797
plot