Fitness for 5 genes in Pseudomonas fluorescens FW300-N1B4

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500 ntPf1N1B4_3772 and Pf1N1B4_3773 are separated by 102 nucleotidesPf1N1B4_3773 and Pf1N1B4_3774 are separated by 77 nucleotidesPf1N1B4_3774 and Pf1N1B4_3775 are separated by 75 nucleotidesPf1N1B4_3775 and Pf1N1B4_3776 are separated by 131 nucleotides Pf1N1B4_3772 - Glutaredoxin, at 4,183,047 to 4,183,418 _3772 Pf1N1B4_3773 - GTP cyclohydrolase I (EC 3.5.4.16) type 1, at 4,183,521 to 4,184,066 _3773 Pf1N1B4_3774 - Smr domain protein, at 4,184,144 to 4,184,701 _3774 Pf1N1B4_3775 - FIG00956876: hypothetical protein, at 4,184,777 to 4,185,097 _3775 Pf1N1B4_3776 - Isochorismatase (EC 3.3.2.1), at 4,185,229 to 4,185,819 _3776
Group Condition Pf1N1B4_3772 Pf1N1B4_3773 Pf1N1B4_3774 Pf1N1B4_3775 Pf1N1B4_3776
nitrogen source nitrogen source nitrite 0.1mM -0.4 N.D. N.D. -2.2 N.D.
stress Fusidic 0.0625 mg/ml +0.4 N.D. N.D. -2.8 N.D.
nitrogen source nitrogen source nitrate 20mM -0.8 N.D. N.D. -1.4 N.D.
anaerobic N2E2wt with N1B4m denitrifying repA +0.1 N.D. N.D. -2.0 N.D.
denitrifying Nitrate reduction, replicate C +0.0 N.D. N.D. -1.9 N.D.
stress Aluminum chloride 2.5 mM +0.1 N.D. N.D. -1.9 N.D.
denitrifying Nitrate reduction, replicate A +0.1 N.D. N.D. -1.8 N.D.
nitrogen source L-Methionine (N) -0.1 N.D. N.D. -1.5 N.D.
stress Cholin acetate 20 mM +0.2 N.D. N.D. -1.8 N.D.
nitrogen source L-Citrulline (N) -0.1 N.D. N.D. -1.2 N.D.
stress Chlorite 1 mM -0.1 N.D. N.D. -1.2 N.D.
denitrifying Nitrate reduction, replicate C t1 -0.3 N.D. N.D. -1.1 N.D.
anaerobic N2E2wt with N1B4m denitrifying repB +0.3 N.D. N.D. -1.6 N.D.
carbon source carbon source Sucrose 0.25mM -1.7 N.D. N.D. +0.6 N.D.
stress Dimethyl Sulfoxide 6.5 vol% +0.2 N.D. N.D. -1.3 N.D.
anaerobic Nitrate reduction -1.2 N.D. N.D. +0.2 N.D.
stress Tetracycline 0.0004 mg/ml +0.2 N.D. N.D. -1.1 N.D.
carbon source carbon source Sucrose 1mM +0.9 N.D. N.D. -1.8 N.D.
lb LB +0.3 N.D. N.D. -1.1 N.D.
lb LB +0.4 N.D. N.D. -1.2 N.D.
stress Carbenicillin 2 mg/ml +0.3 N.D. N.D. -1.1 N.D.
stress Cisplatin 0.006 mg/ml +0.7 N.D. N.D. -1.4 N.D.
stress Thallium(I) acetate 0.008 mg/ml +0.4 N.D. N.D. -0.9 N.D.
denitrifying Denitrifying in presence of WT Pseudomonas N2-E3; replicate C; timepoint 1 +0.5 N.D. N.D. -1.1 N.D.
stress methylglyoxal 0.008 vol% +0.4 N.D. N.D. -0.9 N.D.
stress Gentamicin 0.001 mg/ml +0.5 N.D. N.D. -0.8 N.D.
nitrogen source Thymine (N) +0.4 N.D. N.D. -0.8 N.D.
stress Bacitracin 2 mg/ml +0.6 N.D. N.D. -0.9 N.D.
stress Chloride 300 mM +0.6 N.D. N.D. +0.6 N.D.
pH Minimal media pH9 +0.8 N.D. N.D. +0.8 N.D.
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