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Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens FW300-N1B4
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Pf1N1B4_3733 and Pf1N1B4_3734 are separated by 269 nucleotides
Pf1N1B4_3734 and Pf1N1B4_3735 are separated by 294 nucleotides
Pf1N1B4_3735 and Pf1N1B4_3736 are separated by 115 nucleotides
Pf1N1B4_3736 and Pf1N1B4_3737 overlap by 4 nucleotides
Pf1N1B4_3733 - FIG00959155: hypothetical protein, at 4,143,923 to 4,145,755
_3733
Pf1N1B4_3734 - FKBP-type peptidyl-prolyl cis-trans isomerase FklB (EC 5.2.1.8), at 4,146,025 to 4,146,738
_3734
Pf1N1B4_3735 - DUF1232 domain-containing protein, at 4,147,033 to 4,147,488
_3735
Pf1N1B4_3736 - Transcriptional regulator, Cro/CI family, at 4,147,604 to 4,147,945
_3736
Pf1N1B4_3737 - FIG00954549: hypothetical protein, at 4,147,942 to 4,148,313
_3737
Group
Condition
Pf1N1B4
_3733
Pf1N1B4
_3734
Pf1N1B4
_3735
Pf1N1B4
_3736
Pf1N1B4
_3737
nitrogen source
nitrogen source nitrate 20mM
-0.6
N.D.
N.D.
N.D.
N.D.
nitrogen source
nitrogen source nitrite 0.5mM
-0.4
N.D.
N.D.
N.D.
N.D.
carbon source
carbon source Sucrose 0.5mM
-0.4
N.D.
N.D.
N.D.
N.D.
carbon source
L-Lactate (C)
-0.4
N.D.
N.D.
N.D.
N.D.
stress
Cisplatin 0.006 mg/ml
-0.4
N.D.
N.D.
N.D.
N.D.
nitrogen source
nitrogen source nitrite 0.1mM
-0.3
N.D.
N.D.
N.D.
N.D.
carbon source
carbon source Sucrose 5mM
-0.3
N.D.
N.D.
N.D.
N.D.
denitrifying
Nitrate reduction, replicate B
-0.3
N.D.
N.D.
N.D.
N.D.
denitrifying
Nitrate reduction, replicate C t2
-0.2
N.D.
N.D.
N.D.
N.D.
stress
nitrite 10 mM
-0.2
N.D.
N.D.
N.D.
N.D.
carbon source
D-Glucose (C)
-0.2
N.D.
N.D.
N.D.
N.D.
nophagecontrol
Time16-nophage
-0.2
N.D.
N.D.
N.D.
N.D.
carbon source
D,L-Lactate (C)
-0.2
N.D.
N.D.
N.D.
N.D.
nitrogen source
nitrogen source nitrate 20mM
-0.2
N.D.
N.D.
N.D.
N.D.
denitrifying
Nitrate reduction, replicate C t3
-0.2
N.D.
N.D.
N.D.
N.D.
phagefrs
Time16-FRS
-0.2
N.D.
N.D.
N.D.
N.D.
nitrogen source
L-Citrulline (N)
+0.2
N.D.
N.D.
N.D.
N.D.
stress
5-Hydroxymethylfurfural 2.5 mM
+0.2
N.D.
N.D.
N.D.
N.D.
carbon source
butyrate (C)
+0.2
N.D.
N.D.
N.D.
N.D.
stress
Doxycycline hyclate 0.0001 mg/ml
+0.2
N.D.
N.D.
N.D.
N.D.
stress
Benzethonium chloride 0.0125 mM
+0.2
N.D.
N.D.
N.D.
N.D.
stress
Chloride 200 mM
+0.2
N.D.
N.D.
N.D.
N.D.
nitrogen source
L-Valine (N)
+0.2
N.D.
N.D.
N.D.
N.D.
carbon source
D-Mannose (C)
+0.2
N.D.
N.D.
N.D.
N.D.
nitrogen source
L-Methionine (N)
+0.3
N.D.
N.D.
N.D.
N.D.
denitrifying
Nitrate reduction, replicate B t2
+0.3
N.D.
N.D.
N.D.
N.D.
stress
Chlorite 1 mM
+0.3
N.D.
N.D.
N.D.
N.D.
lb
LB
+0.3
N.D.
N.D.
N.D.
N.D.
carbon source
carbon source Sucrose 1mM
+0.4
N.D.
N.D.
N.D.
N.D.
stress
Fusidic 0.0625 mg/ml
+0.4
N.D.
N.D.
N.D.
N.D.
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