Fitness for 5 genes in Pseudomonas fluorescens FW300-N1B4

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500 ntPf1N1B4_3724 and Pf1N1B4_3725 are separated by 140 nucleotidesPf1N1B4_3725 and Pf1N1B4_3726 are separated by 32 nucleotidesPf1N1B4_3726 and Pf1N1B4_3727 are separated by 412 nucleotidesPf1N1B4_3727 and Pf1N1B4_3728 are separated by 127 nucleotides Pf1N1B4_3724 - DNA recombination protein RmuC, at 4,130,503 to 4,131,981 _3724 Pf1N1B4_3725 - Sensory box histidine kinase/response regulator, at 4,132,122 to 4,134,224 _3725 Pf1N1B4_3726 - Sensory box histidine kinase/response regulator, at 4,134,257 to 4,135,591 _3726 Pf1N1B4_3727 - C4-dicarboxylate transporter/malic acid transport protein, at 4,136,004 to 4,137,155 _3727 Pf1N1B4_3728 - 1-acyl-sn-glycerol-3-phosphate acyltransferase (EC 2.3.1.51), at 4,137,283 to 4,139,157 _3728
Group Condition Pf1N1B4_3724 Pf1N1B4_3725 Pf1N1B4_3726 Pf1N1B4_3727 Pf1N1B4_3728
carbon source acetate (C) -0.3 -2.5 -3.1 -0.2 +0.0
carbon source acetate (C) -0.4 -2.2 -2.5 -0.0 +0.0
carbon source Carnitine Hydrochloride (C) -0.0 -2.0 -1.5 -0.3 -0.2
carbon source pyruvate (C) -0.4 -1.8 -1.3 -0.3 +0.1
carbon source carbon source Sucrose 0.25mM -0.3 -0.8 -1.4 -0.2 -0.4
carbon source L-Leucine (C) -0.2 -1.0 -1.5 +0.2 -0.3
carbon source Cytidine (C) -0.0 -0.9 -1.3 -0.1 -0.2
carbon source m-Inositol (C) -0.1 -1.1 -1.0 -0.1 -0.3
carbon source carbon source Sucrose 1mM -1.0 -0.5 -0.1 -0.3 -0.1
carbon source carbon source Sucrose 0.25mM -0.5 -0.5 -1.0 +0.3 -0.4
carbon source pyruvate (C) -0.3 -0.6 -1.1 -0.1 +0.3
anaerobic Nitrate reduction -0.8 -0.5 -0.2 -0.2 -0.0
carbon source L-Arginine (C) -0.2 -0.3 -1.0 -0.0 -0.1
carbon source L-Glutamine (C) -0.7 -0.1 -0.1 -0.2 -0.3
stress Sisomicin 0.001 mg/ml -0.9 -0.1 -0.1 -0.3 -0.0
stress Aluminum chloride 2.5 mM -0.6 -0.2 -0.0 -0.6 +0.0
denitrifying Nitrate reduction, replicate A -0.2 +0.4 -1.3 +0.0 -0.3
carbon source L-Citrulline (C) -0.1 -0.5 -0.6 +0.0 -0.2
carbon source carbon source Sucrose 1mM -0.4 -0.1 -0.3 +0.4 -0.7
nitrogen source nitrogen source nitrite 0.1mM -0.9 +0.4 -0.3 -0.1 +0.1
denitrifying Nitrate reduction, replicate B -0.3 +0.4 -0.7 -0.3 +0.3
temperature LB 37C -0.2 -0.0 +0.4 -0.2 -0.5
stress Benzethonium chloride 0.0125 mM -0.9 +0.5 -0.1 +0.1 -0.1
stress Fusidic 0.125 mg/ml -0.6 +0.2 -0.1 -0.3 +0.5
nitrogen source D-Glucosamine Hydrochloride (N) -0.1 +0.3 +0.3 +0.3 -0.7
stress Fusidic 0.0625 mg/ml +0.1 -0.2 -0.1 -0.4 +0.6
denitrifying Denitrifying in presence of WT Pseudomonas N2-E3; replicate C; timepoint 1 -0.7 +0.5 +0.3 -0.1 +0.2
stress Spectinomycin 0.025 mg/ml -0.6 +0.4 +0.4 +0.2 +0.0
stress sodium fluoride 12.5 mM -0.5 +0.3 +0.3 -0.1 +0.5
denitrifying Nitrate reduction in presence of wild-type Pseudomonas N2-E2; replicate B +0.5 +0.5 +0.1 +0.0 -0.4
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