Fitness for 5 genes in Pseudomonas fluorescens FW300-N1B4

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500 ntPf1N1B4_3723 and Pf1N1B4_3724 are separated by 61 nucleotidesPf1N1B4_3724 and Pf1N1B4_3725 are separated by 140 nucleotidesPf1N1B4_3725 and Pf1N1B4_3726 are separated by 32 nucleotidesPf1N1B4_3726 and Pf1N1B4_3727 are separated by 412 nucleotides Pf1N1B4_3723 - FIG00957314: hypothetical protein, at 4,130,190 to 4,130,441 _3723 Pf1N1B4_3724 - DNA recombination protein RmuC, at 4,130,503 to 4,131,981 _3724 Pf1N1B4_3725 - Sensory box histidine kinase/response regulator, at 4,132,122 to 4,134,224 _3725 Pf1N1B4_3726 - Sensory box histidine kinase/response regulator, at 4,134,257 to 4,135,591 _3726 Pf1N1B4_3727 - C4-dicarboxylate transporter/malic acid transport protein, at 4,136,004 to 4,137,155 _3727
Group Condition Pf1N1B4_3723 Pf1N1B4_3724 Pf1N1B4_3725 Pf1N1B4_3726 Pf1N1B4_3727
carbon source acetate (C) -0.0 -0.3 -2.5 -3.1 -0.2
carbon source acetate (C) -0.2 -0.4 -2.2 -2.5 -0.0
carbon source Carnitine Hydrochloride (C) -0.5 -0.0 -2.0 -1.5 -0.3
carbon source pyruvate (C) +0.4 -0.4 -1.8 -1.3 -0.3
carbon source m-Inositol (C) -1.0 -0.1 -1.1 -1.0 -0.1
carbon source carbon source Sucrose 0.25mM -0.5 -0.3 -0.8 -1.4 -0.2
carbon source L-Leucine (C) -0.5 -0.2 -1.0 -1.5 +0.2
carbon source Cytidine (C) -0.3 -0.0 -0.9 -1.3 -0.1
carbon source pyruvate (C) -0.3 -0.3 -0.6 -1.1 -0.1
stress Aluminum chloride 2.5 mM -0.8 -0.6 -0.2 -0.0 -0.6
carbon source carbon source Sucrose 1mM -0.3 -1.0 -0.5 -0.1 -0.3
carbon source L-Arginine (C) -0.6 -0.2 -0.3 -1.0 -0.0
carbon source D-Galacturonic Acid (C) -0.9 -0.1 -0.5 -0.5 -0.1
stress Sisomicin 0.001 mg/ml -0.5 -0.9 -0.1 -0.1 -0.3
nitrogen source L-Methionine (N) -1.0 -0.3 -0.0 -0.2 -0.4
carbon source D-Trehalose (C) -0.9 -0.2 -0.3 -0.5 -0.0
stress Cholin acetate 20 mM -0.5 -0.4 -0.5 -0.1 +0.1
carbon source carbon source Sucrose 0.25mM +0.2 -0.5 -0.5 -1.0 +0.3
pH Minimal media pH9 -1.1 +0.2 +0.0 -0.3 -0.1
carbon source D-Fructose (C) -0.5 -0.4 -0.5 -0.1 +0.3
anaerobic Nitrate reduction +0.6 -0.8 -0.5 -0.2 -0.2
pH Minimal media pH9 -1.0 -0.1 -0.3 -0.0 +0.3
stress Carbenicillin 2 mg/ml -0.6 -0.7 +0.3 -0.1 +0.1
denitrifying Nitrate reduction, replicate B -0.0 -0.3 +0.4 -0.7 -0.3
nitrogen source nitrogen source nitrite 0.1mM +0.1 -0.9 +0.4 -0.3 -0.1
denitrifying Nitrate reduction, replicate A +0.3 -0.2 +0.4 -1.3 +0.0
stress Benzethonium chloride 0.0125 mM +0.4 -0.9 +0.5 -0.1 +0.1
denitrifying Denitrifying in presence of WT Pseudomonas N2-E3; replicate C; timepoint 1 +0.4 -0.7 +0.5 +0.3 -0.1
stress Spectinomycin 0.025 mg/ml +0.1 -0.6 +0.4 +0.4 +0.2
temperature LB 37C +1.0 -0.2 -0.0 +0.4 -0.2
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