Fitness for 5 genes in Pseudomonas fluorescens FW300-N1B4

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 191 experiments or choose conditions or try the comparative fitness browser

500 ntPf1N1B4_362 and Pf1N1B4_363 overlap by 8 nucleotidesPf1N1B4_363 and Pf1N1B4_364 are separated by 3 nucleotidesPf1N1B4_364 and Pf1N1B4_365 are separated by 286 nucleotidesPf1N1B4_365 and Pf1N1B4_366 are separated by 12 nucleotides Pf1N1B4_362 - Lipid A export ATP-binding/permease protein MsbA, at 430,596 to 432,413 _362 Pf1N1B4_363 - Thioredoxin, at 432,406 to 433,044 _363 Pf1N1B4_364 - Rhodanese domain protein UPF0176, at 433,048 to 433,989 _364 Pf1N1B4_365 - Cell division protein BolA, at 434,276 to 434,575 _365 Pf1N1B4_366 - FIG00954136: hypothetical protein, at 434,588 to 435,109 _366
Group Condition Pf1N1B4_362 Pf1N1B4_363 Pf1N1B4_364 Pf1N1B4_365 Pf1N1B4_366
carbon source D-Lactate (C) +0.0 -0.3 -0.8 -2.3 -1.0
carbon source D-Lactate (C) -0.1 +0.2 -0.6 -2.6 -1.0
carbon source D,L-Lactate (C) -0.2 -0.2 -1.0 -1.5 -0.8
carbon source D,L-Lactate (C) -0.2 -0.0 -0.9 -1.3 -0.7
stress Paraquat dichloride 0.016 mg/mL -0.2 -0.9 -0.2 -0.9 -0.5
carbon source L-Lactate (C) -0.2 +0.0 -0.4 -1.4 -0.5
carbon source L-Lactate (C) +0.3 -0.1 -0.1 -1.6 -1.0
stress Carbenicillin 2 mg/ml -0.3 -0.5 -0.7 -0.2 -0.6
carbon source L-Histidine (C) +0.0 -0.3 -1.4 -0.4 -0.2
stress Thallium(I) acetate 0.008 mg/ml -0.2 +0.0 -1.1 -1.0 -0.1
carbon source carbon source Sucrose 5mM +0.3 -0.5 -0.5 -1.4 -0.0
stress D-Cycloserine 0.1 mg/ml +0.0 -0.7 -0.2 -0.7 -0.6
carbon source carbon source Sucrose 0.25mM +0.0 -1.1 -0.8 -0.9 +0.7
stress nitrite 10 mM +0.2 -0.4 -1.4 -0.4 -0.0
stress Aluminum chloride 2.5 mM +0.2 -0.5 -0.2 -0.2 -1.3
nitrogen source Uridine (N) +0.1 +0.5 -0.8 -1.1 -0.4
carbon source Glycerol (C) +0.1 -0.1 -0.2 -1.3 -0.4
carbon source carbon source Sucrose 5mM +0.0 +0.1 -1.9 +0.0 +0.1
anaerobic Nitrate reduction -0.2 +0.4 -0.9 -0.6 -0.1
carbon source carbon source Sucrose 1mM +0.3 -0.1 -0.9 -0.9 +0.6
denitrifying Denitrifying in presence of WT Pseudomonas N2-E3; replicate C; timepoint 1 +0.2 -0.1 -1.4 +0.6 -0.2
carbon source carbon source Sucrose 0.25mM +0.3 +0.2 -1.8 -0.3 +0.9
carbon source carbon source Sucrose 0.5mM +0.0 +0.4 -0.9 -0.9 +0.8
carbon source carbon source Sucrose 1mM -0.2 +0.3 -0.8 -0.5 +0.6
stress Rifampicin 0.004 mg/ml +0.0 -0.4 -0.6 +0.3 +0.7
pH Minimal media pH9 +0.1 +0.0 -1.3 +0.6 +1.1
pH Minimal media pH9 -0.3 +0.6 -0.7 +0.5 +1.4
nitrogen source nitrogen source nitrite 0.1mM +0.6 +0.8 +0.3 -0.4 +0.4
stress Benzethonium chloride 0.0125 mM +0.1 +0.7 +0.6 +0.5 +0.5
stress Doxycycline hyclate 0.0001 mg/ml +0.2 +0.7 -0.5 +1.3 +1.4
remove
Pf1N1B4_362
plot		 remove
Pf1N1B4_363
plot		 remove
Pf1N1B4_364		 remove
Pf1N1B4_365
plot		 remove
Pf1N1B4_366
plot