Fitness for 5 genes in Pseudomonas fluorescens FW300-N1B4

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500 ntPf1N1B4_3628 and Pf1N1B4_3629 are separated by 55 nucleotidesPf1N1B4_3629 and Pf1N1B4_3630 are separated by 49 nucleotidesPf1N1B4_3630 and Pf1N1B4_3631 overlap by 1 nucleotidesPf1N1B4_3631 and Pf1N1B4_3632 are separated by 12 nucleotides Pf1N1B4_3628 - Chemotaxis response - phosphatase CheZ, at 4,035,591 to 4,036,379 _3628 Pf1N1B4_3629 - Signal transduction histidine kinase CheA (EC 2.7.3.-), at 4,036,435 to 4,038,678 _3629 Pf1N1B4_3630 - Chemotaxis response regulator protein-glutamate methylesterase CheB (EC 3.1.1.61), at 4,038,728 to 4,039,861 _3630 Pf1N1B4_3631 - Flagellar motor rotation protein MotA, at 4,039,861 to 4,040,601 _3631 Pf1N1B4_3632 - Flagellar motor rotation protein MotB, at 4,040,614 to 4,041,507 _3632
Group Condition Pf1N1B4_3628 Pf1N1B4_3629 Pf1N1B4_3630 Pf1N1B4_3631 Pf1N1B4_3632
nitrogen source D-Glucosamine Hydrochloride (N) N.D. -1.0 -0.5 -0.4 -0.4
stress Fusidic 0.125 mg/ml N.D. -0.6 -0.1 -0.6 -0.6
nitrogen source Cytosine (N) N.D. -0.3 -0.4 -1.0 -0.0
carbon source carbon source Sucrose 1mM N.D. +1.0 -0.6 -1.3 -0.7
lb LB N.D. -0.9 -0.5 +0.0 -0.2
denitrifying Nitrate reduction, replicate C N.D. -0.8 -0.3 -0.5 +0.2
carbon source carbon source Sucrose 0.25mM N.D. -0.4 -0.3 +0.2 -0.9
stress 1-ethyl-3-methylimidazolium lysine 5 mM N.D. -0.1 +0.6 -1.3 -0.6
carbon source L-Asparagine (C) N.D. +0.3 -0.5 -0.8 -0.2
carbon source L-Arginine (C) N.D. +0.3 -0.5 -0.7 -0.4
nitrogen source nitrogen source nitrite 1mM N.D. +0.2 -0.3 -0.1 -1.0
nitrogen source L-Methionine (N) N.D. -0.7 +0.7 -0.2 -1.0
nitrogen source Uridine (N) N.D. +0.2 -0.8 -0.6 +0.0
stress D-Cycloserine 0.1 mg/ml N.D. +0.2 -0.2 -0.4 -0.7
carbon source carbon source Sucrose 0.25mM N.D. +0.4 -0.3 -0.7 -0.4
nitrogen source Putrescine (N) N.D. +0.4 +0.1 -0.3 -1.0
carbon source D-Galacturonic Acid (C) N.D. +0.3 +0.2 -0.8 -0.5
stress 5-Hydroxymethylfurfural 2.5 mM N.D. +0.1 +0.4 -0.6 -0.6
stress Paraquat dichloride 0.016 mg/mL N.D. -0.3 +0.3 -1.0 +0.4
lb LB N.D. +0.5 +0.2 -0.8 -0.4
carbon source Uridine (C) N.D. +0.4 +0.3 -0.2 -0.8
carbon source L-Histidine (C) N.D. +0.3 +0.4 -0.5 -0.5
carbon source D-Fructose (C) N.D. -0.5 +0.6 -0.4 +0.3
pH Minimal media pH9 N.D. +0.6 -0.2 -0.6 +0.3
stress Carbenicillin 2 mg/ml N.D. +0.3 +0.7 -0.4 -0.3
stress nitrite 10 mM N.D. +0.2 +0.7 +0.2 -0.6
carbon source Fumarate (C) N.D. -0.2 +0.7 -0.5 +0.5
temperature LB 37C N.D. -0.3 +0.7 -0.3 +0.4
denitrifying Nitrate reduction, replicate A t2 N.D. +0.3 +0.5 +0.6 -0.5
anaerobic N2E2wt with N1B4m denitrifying repB N.D. +0.4 -0.1 +0.7 +0.6
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