Fitness for 5 genes in Pseudomonas fluorescens FW300-N1B4

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 191 experiments or choose conditions or try the comparative fitness browser

500 ntPf1N1B4_3612 and Pf1N1B4_3613 are separated by 47 nucleotidesPf1N1B4_3613 and Pf1N1B4_3614 are separated by 60 nucleotidesPf1N1B4_3614 and Pf1N1B4_3615 are separated by 9 nucleotidesPf1N1B4_3615 and Pf1N1B4_3616 are separated by 68 nucleotides Pf1N1B4_3612 - Flagellar hook-length control protein FliK, at 4,022,604 to 4,023,965 _3612 Pf1N1B4_3613 - hypothetical protein, at 4,024,013 to 4,024,129 _3613 Pf1N1B4_3614 - Flagellar biosynthesis protein FliL, at 4,024,190 to 4,024,693 _3614 Pf1N1B4_3615 - Flagellar motor switch protein FliM, at 4,024,703 to 4,025,671 _3615 Pf1N1B4_3616 - Flagellar motor switch protein FliN, at 4,025,740 to 4,026,198 _3616
Group Condition Pf1N1B4_3612 Pf1N1B4_3613 Pf1N1B4_3614 Pf1N1B4_3615 Pf1N1B4_3616
carbon source acetate (C) -0.4 -1.3 -0.1 -0.5 N.D.
carbon source carbon source Sucrose 5mM +0.1 -2.6 -0.0 +0.3 N.D.
carbon source carbon source Sucrose 5mM +0.1 -1.5 -0.6 -0.1 N.D.
carbon source D-Gluconic Acid (C) -0.5 -1.0 -0.2 -0.4 N.D.
pH Minimal media pH9 -0.5 -0.7 -0.5 -0.1 N.D.
stress 1-ethyl-3-methylimidazolium chloride 80 mM -0.2 -1.2 -0.3 -0.1 N.D.
carbon source D-Glucose (C) -0.2 -0.7 -0.3 -0.5 N.D.
carbon source D-Fructose (C) -0.3 -1.2 +0.1 -0.3 N.D.
phagefrs Time16-FRS -0.1 -1.7 +0.2 +0.0 N.D.
carbon source octanoate (C) +0.5 -2.2 +0.1 +0.2 N.D.
nophagecontrol TIme6-nophage -1.1 -0.5 +0.3 -0.1 N.D.
stress methylglyoxal 0.004 vol% +0.1 -1.2 -0.3 +0.1 N.D.
nitrogen source nitrogen source nitrate 20mM +0.0 -1.3 +0.2 -0.2 N.D.
anaerobic N2E2wt with N1B4m denitrifying repA +0.2 -0.5 -0.2 -0.7 N.D.
denitrifying Denitrifying in presence of WT Pseudomonas N2-E3; replicate B; timepoint 1 -0.5 -1.0 +0.2 -0.1 N.D.
carbon source carbon source Sucrose 1mM +0.1 -1.4 -0.1 +0.2 N.D.
phagefrs Time16-FRS +0.4 -1.1 -0.3 -0.1 N.D.
denitrifying Denitrifying in presence of WT Pseudomonas N2-E3; replicate C; timepoint 1 +0.4 -1.1 +0.2 -0.0 N.D.
carbon source carbon source Sucrose 1mM -0.8 +0.3 -0.3 +0.4 N.D.
anaerobic N2E2wt with N1B4m denitrifying repB +0.3 +0.3 -1.0 +0.1 N.D.
temperature LB 37C -0.7 +1.2 -0.6 +0.0 N.D.
stress acetate 20 mM -0.6 +0.9 -0.0 -0.2 N.D.
carbon source carbon source Sucrose 0.5mM +0.6 -0.9 +0.0 +0.5 N.D.
stress Cobalt chloride 0.3125 mM +0.3 +1.0 -0.3 -0.5 N.D.
stress Carbenicillin 2 mg/ml -0.2 +1.2 -0.3 -0.2 N.D.
stress benzoic 0.58 mg/ml +0.3 +0.6 +0.4 -0.3 N.D.
lb LB +0.7 +0.8 -0.2 -0.0 N.D.
carbon source carbon source Sucrose 0.25mM +0.0 +1.6 +0.5 -0.4 N.D.
denitrifying Nitrate reduction, replicate C +0.6 +0.1 +0.8 +0.5 N.D.
carbon source carbon source Sucrose 0.25mM +0.2 +1.0 +0.3 +0.6 N.D.
remove
Pf1N1B4_3612
plot		 remove
Pf1N1B4_3613
plot		 remove
Pf1N1B4_3614		 remove
Pf1N1B4_3615
plot		 remove
Pf1N1B4_3616
plot