Fitness for 5 genes in Pseudomonas fluorescens FW300-N1B4

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500 ntPf1N1B4_3538 and Pf1N1B4_3539 are separated by 136 nucleotidesPf1N1B4_3539 and Pf1N1B4_3540 are separated by 72 nucleotidesPf1N1B4_3540 and Pf1N1B4_3541 are separated by 99 nucleotidesPf1N1B4_3541 and Pf1N1B4_3542 are separated by 191 nucleotides Pf1N1B4_3538 - Transcriptional regulator, AraC family, at 3,945,177 to 3,945,935 _3538 Pf1N1B4_3539 - Ser/Thr protein phosphatase family protein, UDP-2,3-diacylglucosamine hydrolase (EC 3.6.1.-) homolog, at 3,946,072 to 3,946,887 _3539 Pf1N1B4_3540 - Metal-dependent phosphohydrolase, HD subdomain, at 3,946,960 to 3,947,550 _3540 Pf1N1B4_3541 - FIG027190: Putative transmembrane protein, at 3,947,650 to 3,947,961 _3541 Pf1N1B4_3542 - Transcriptional regulator, AraC family, at 3,948,153 to 3,949,181 _3542
Group Condition Pf1N1B4_3538 Pf1N1B4_3539 Pf1N1B4_3540 Pf1N1B4_3541 Pf1N1B4_3542
nitrogen source nitrogen source nitrate 20mM -3.8 +0.1 +0.3 -0.2 -0.3
anaerobic N2E2wt with N1B4m denitrifying repA -2.2 -0.1 -0.2 -1.1 -0.3
carbon source carbon source Sucrose 5mM -1.2 -0.1 +0.0 -0.7 -0.6
temperature LB 37C -1.7 -0.2 +0.0 -0.3 -0.5
nitrogen source nitrogen source Ammonium chloride 20mM -0.4 -0.2 +0.4 -1.3 -0.1
carbon source carbon source Sucrose 0.25mM +0.0 +0.0 +0.2 -1.7 +0.2
anaerobic Nitrate reduction +0.3 -0.2 -0.2 -0.7 -0.5
nitrogen source nitrate (N) -0.6 -0.3 +0.4 -0.2 -0.3
carbon source carbon source Sucrose 20mM -0.8 +0.2 +0.3 -0.6 -0.1
carbon source L-Arabinose (C) -1.0 +0.2 +0.2 -0.3 -0.1
carbon source carbon source Sucrose 1mM -0.5 -0.2 +0.6 -0.6 -0.5
carbon source L-Glutamic (C) -1.2 -0.0 +0.4 -0.5 +0.3
stress Aluminum chloride 2.5 mM -0.6 -0.5 -0.0 +0.6 -0.4
carbon source carbon source Sucrose 5mM -0.6 +0.0 +0.1 -0.9 +0.5
nitrogen source nitrogen source nitrite 0.1mM +0.5 -0.0 +0.3 -1.8 +0.1
nitrogen source Uridine (N) +0.6 -0.4 +0.4 -0.5 -0.6
carbon source carbon source Sucrose 0.5mM -1.3 -0.0 +0.6 +0.2 +0.1
anaerobic Nitrate reduction -1.0 +0.1 +0.2 +0.8 -0.4
nitrogen source L-Methionine (N) -1.1 +0.1 -0.1 +0.6 +0.2
nitrogen source Cytosine (N) +0.6 -0.5 +0.3 -0.0 -0.7
nitrogen source L-Leucine (N) -1.4 -0.0 +0.5 +0.7 +0.0
anaerobic Nitrate reduction -1.0 +0.1 +0.5 -0.0 +0.4
nitrogen source Ammonium chloride (N) +0.7 -0.3 +0.3 +0.1 -0.5
stress Chlorite 1 mM +0.7 +0.3 +0.4 -0.8 -0.0
nitrogen source Thymine (N) +0.8 -0.3 +0.7 -0.1 -0.5
carbon source carbon source Sucrose 1mM -1.5 +0.3 +0.9 +0.8 +0.1
stress Fusidic 0.125 mg/ml -0.5 -0.4 +0.6 +0.8 +0.4
temperature LB 37C +0.4 +0.2 +0.7 +0.1 -0.5
stress nitrate 100 mM +0.5 +0.5 -0.3 +0.3 +0.4
stress Cephalothin 2.5 mg/ml +0.8 +0.3 +0.5 -0.2 +0.2
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