Fitness for 5 genes in Pseudomonas fluorescens FW300-N1B4

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 191 experiments or choose conditions or try the comparative fitness browser

500 ntPf1N1B4_3524 and Pf1N1B4_3525 overlap by 4 nucleotidesPf1N1B4_3525 and Pf1N1B4_3526 are separated by 50 nucleotidesPf1N1B4_3526 and Pf1N1B4_3527 are separated by 8 nucleotidesPf1N1B4_3527 and Pf1N1B4_3528 are separated by 68 nucleotides Pf1N1B4_3524 - FIG00955363: hypothetical protein, at 3,930,236 to 3,931,042 _3524 Pf1N1B4_3525 - hydrolase, alpha/beta fold family, at 3,931,039 to 3,931,893 _3525 Pf1N1B4_3526 - Glutathione S-transferase (EC 2.5.1.18), at 3,931,944 to 3,932,603 _3526 Pf1N1B4_3527 - Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit, at 3,932,612 to 3,933,418 _3527 Pf1N1B4_3528 - Putative membrane protein, at 3,933,487 to 3,934,542 _3528
Group Condition Pf1N1B4_3524 Pf1N1B4_3525 Pf1N1B4_3526 Pf1N1B4_3527 Pf1N1B4_3528
temperature LB 37C -0.4 -3.5 -0.3 -0.4 -0.3
lb LB -0.3 -1.9 +0.1 -0.2 -0.4
stress nitrate 100 mM -0.4 -1.8 -0.1 -0.1 -0.2
nitrogen source nitrogen source nitrate 20mM -1.6 -0.2 -0.4 -0.1 -0.2
nitrogen source nitrate (N) -1.0 -0.7 -0.1 -0.3 -0.4
carbon source D-Ribose (C) -0.5 -1.1 -0.3 -0.4 -0.2
carbon source L-Arabinose (C) -1.3 -0.3 -0.2 -0.5 -0.1
carbon source carbon source Sucrose 5mM -0.4 -1.3 -0.4 -0.4 +0.1
carbon source D,L-Lactate (C) -0.1 -0.6 -0.4 -0.6 -0.8
pH Minimal media pH9 +0.1 -0.7 -0.1 -0.3 -1.4
carbon source L-Arabinose (C) -0.9 -0.5 -0.1 -0.7 -0.1
pH Minimal media pH9 -0.1 +0.5 +0.3 -1.1 -1.5
carbon source carbon source Sucrose 1mM -1.0 -0.5 -0.0 -0.8 +0.6
stress Tetracycline 0.0004 mg/ml -0.9 -1.1 +0.4 -0.3 +0.2
stress Spectinomycin 0.05 mg/ml +0.1 -1.3 +0.3 -0.8 -0.0
carbon source carbon source Sucrose 1mM -0.8 -1.3 -0.4 +0.2 +0.8
carbon source D-Gluconic Acid (C) -0.4 +0.2 +0.2 -0.6 -0.8
denitrifying Nitrate reduction, replicate B -0.3 -1.3 +0.1 -0.2 +0.6
denitrifying Nitrate reduction, replicate C t3 -0.5 -0.5 +0.2 -0.5 +0.5
carbon source L-Glutamine (C) -0.7 +0.7 +0.3 -0.8 -0.2
carbon source carbon source Sucrose 0.25mM -0.8 +0.3 -0.4 -0.5 +0.8
carbon source m-Inositol (C) -1.0 +0.2 +0.7 -0.3 -0.1
denitrifying Denitrifying in presence of WT Pseudomonas N2-E3; replicate C; timepoint 1 -0.5 -0.8 +0.3 +0.1 +0.8
carbon source D-Trehalose (C) -1.0 +0.4 +0.6 +0.2 -0.2
stress Cisplatin 0.006 mg/ml -0.5 +1.1 +0.3 -0.0 -0.6
nitrogen source nitrogen source nitrite 0.1mM -1.0 +0.5 +0.5 +0.1 +0.2
stress Chlorite 1 mM +0.4 +0.6 +0.6 -0.5 +0.0
stress Fusidic 0.125 mg/ml -0.3 +0.8 +1.3 -0.6 +0.0
temperature LB 37C -0.1 +1.8 +0.3 -0.1 -0.1
lb LB +0.3 +0.9 +0.7 +0.4 -0.1
remove
Pf1N1B4_3524
plot
remove
Pf1N1B4_3525
plot
remove
Pf1N1B4_3526
remove
Pf1N1B4_3527
plot
remove
Pf1N1B4_3528
plot