Fitness for 5 genes in Pseudomonas fluorescens FW300-N1B4

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500 ntPf1N1B4_3494 and Pf1N1B4_3495 overlap by 4 nucleotidesPf1N1B4_3495 and Pf1N1B4_3496 are separated by 160 nucleotidesPf1N1B4_3496 and Pf1N1B4_3497 are separated by 233 nucleotidesPf1N1B4_3497 and Pf1N1B4_3498 overlap by 1 nucleotides Pf1N1B4_3494 - Flavoprotein WrbA, at 3,901,012 to 3,901,608 _3494 Pf1N1B4_3495 - Arsenate reductase (EC 1.20.4.1), at 3,901,605 to 3,901,958 _3495 Pf1N1B4_3496 - Cytochrome c-type biogenesis protein ResA, at 3,902,119 to 3,902,520 _3496 Pf1N1B4_3497 - Heat shock protein, at 3,902,754 to 3,903,158 _3497 Pf1N1B4_3498 - FIG00953240: hypothetical protein, at 3,903,158 to 3,903,592 _3498
Group Condition Pf1N1B4_3494 Pf1N1B4_3495 Pf1N1B4_3496 Pf1N1B4_3497 Pf1N1B4_3498
nitrogen source nitrogen source nitrite 0.1mM +0.3 N.D. +0.2 -1.7 -3.0
stress Doxycycline hyclate 0.0001 mg/ml +0.7 N.D. +0.1 -1.5 -1.3
carbon source carbon source Sucrose 0.25mM +0.6 N.D. +0.3 +0.5 -3.1
stress Paraquat dichloride 0.016 mg/mL -0.8 N.D. +0.2 -0.2 -0.9
stress D-Cycloserine 0.1 mg/ml -0.2 N.D. +0.1 -0.0 -1.4
anaerobic Nitrate reduction -0.6 N.D. -0.3 +0.2 -0.7
nitrogen source nitrogen source nitrite 0.5mM -0.0 N.D. +0.1 +0.1 -1.5
temperature LB 37C -0.3 N.D. +0.4 -0.2 -0.8
stress Sisomicin 0.001 mg/ml -1.0 N.D. +0.6 +0.1 -0.6
lb LB -0.2 N.D. +0.0 +0.3 -1.0
carbon source carbon source Sucrose 0.5mM +0.9 N.D. +0.7 -0.4 -2.0
nitrogen source L-Leucine (N) -0.3 N.D. +0.1 +0.4 -0.8
stress nitrate 100 mM -0.6 N.D. +0.4 -0.4 -0.0
stress Dimethyl Sulfoxide 5 vol% -0.9 N.D. -0.1 +0.0 +0.6
carbon source carbon source Sucrose 0.25mM +0.0 N.D. +0.6 +0.3 -1.2
lb LB +0.4 N.D. +0.2 +0.1 -1.0
lb LB -0.4 N.D. +0.0 +0.6 -0.5
nitrogen source nitrate (N) +0.0 N.D. +0.2 +0.6 -1.0
stress Rifampicin 0.004 mg/ml +0.6 N.D. -0.1 +0.1 -0.8
nitrogen source Cytosine (N) +0.3 N.D. +0.2 +0.3 -1.0
stress copper (II) chloride 2.5 mM +0.5 N.D. -0.1 -0.7 +0.3
carbon source carbon source Sucrose 1mM -1.1 N.D. +0.7 +0.6 -0.1
nophagecontrol TIme6-nophage -0.7 N.D. +0.1 -0.0 +0.8
nitrogen source Ammonium chloride (N) +0.6 N.D. +0.3 -0.1 -0.6
temperature LB 37C +0.3 N.D. +0.5 -0.4 +0.4
stress Cisplatin 0.006 mg/ml +1.0 N.D. +0.4 -0.2 -0.2
nitrogen source Thymine (N) +0.5 N.D. +0.4 +0.6 -0.5
anaerobic N2E2wt with N1B4m denitrifying repB +0.3 N.D. -0.6 +0.1 +1.1
pH Minimal media pH9 +0.4 N.D. +1.1 -0.2 +0.1
pH Minimal media pH9 +0.5 N.D. +1.3 +0.1 -0.0
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