Fitness for 5 genes in Pseudomonas fluorescens FW300-N1B4

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500 ntPf1N1B4_3469 and Pf1N1B4_3470 are separated by 144 nucleotidesPf1N1B4_3470 and Pf1N1B4_3471 are separated by 61 nucleotidesPf1N1B4_3471 and Pf1N1B4_3472 are separated by 367 nucleotidesPf1N1B4_3472 and Pf1N1B4_3473 are separated by 3 nucleotides Pf1N1B4_3469 - Flagellar basal-body P-ring formation protein FlgA, at 3,875,088 to 3,875,786 _3469 Pf1N1B4_3470 - Chemotaxis protein CheV (EC 2.7.3.-), at 3,875,931 to 3,876,863 _3470 Pf1N1B4_3471 - Chemotaxis protein methyltransferase CheR (EC 2.1.1.80), at 3,876,925 to 3,877,737 _3471 Pf1N1B4_3472 - Flagellar basal-body rod protein FlgB, at 3,878,105 to 3,878,512 _3472 Pf1N1B4_3473 - Flagellar basal-body rod protein FlgC, at 3,878,516 to 3,878,959 _3473
Group Condition Pf1N1B4_3469 Pf1N1B4_3470 Pf1N1B4_3471 Pf1N1B4_3472 Pf1N1B4_3473
denitrifying Nitrate reduction, replicate B t1 -0.5 -0.3 -0.4 -0.2 -1.2
denitrifying Nitrate reduction, replicate B t2 -0.7 -0.1 -0.3 -0.8 -0.5
temperature LB 37C +0.2 -0.7 -0.2 -0.5 -0.5
nitrogen source nitrogen source nitrite 0.1mM -0.4 -0.7 -0.3 -0.2 +0.0
carbon source carbon source Sucrose 0.25mM -0.1 -0.3 +0.1 +0.1 -1.1
nitrogen source Uridine (N) -0.3 +0.5 -0.1 -0.1 -0.8
stress Nalidixic 0.004 mg/ml +0.2 -0.2 +0.1 -0.3 -0.6
stress Aluminum chloride 2.5 mM -0.2 -0.4 -0.2 -0.4 +0.3
carbon source carbon source Sucrose 1mM +0.4 -1.0 -0.3 -0.2 +0.4
stress Choline Lysine 6 mM +0.2 -0.5 -0.2 -0.4 +0.2
stress 1-ethyl-3-methylimidazolium chloride 80 mM +0.3 -0.6 +0.2 -0.3 -0.0
nitrogen source nitrogen source nitrite 1mM +0.0 -0.5 -0.1 -0.3 +0.4
nitrogen source nitrogen source nitrite 0.1mM -0.2 +0.5 -0.2 -0.1 -0.4
pH Minimal media pH9 -0.3 -0.4 +0.1 +0.4 -0.3
stress Spectinomycin 0.05 mg/ml +0.2 -0.8 +0.1 +0.1 -0.1
temperature LB 37C +0.0 -0.5 -0.5 +0.3 +0.3
carbon source L-Alanine (C) -0.2 -0.1 -0.2 -0.2 +0.5
stress D-Cycloserine 0.1 mg/ml -0.4 -0.1 -0.1 -0.2 +0.5
carbon source L-Isoleucine (C) -0.1 +0.4 -0.3 -0.4 +0.4
stress Sisomicin 0.001 mg/ml +0.5 -0.3 +0.1 -0.5 +0.1
carbon source carbon source Sucrose 5mM +0.3 -0.4 -0.4 -0.1 +0.5
carbon source Putrescine (C) +0.2 -0.1 -0.2 -0.4 +0.5
denitrifying Nitrate reduction, replicate C t1 -0.4 +0.3 +0.5 -0.4 +0.3
anaerobic Nitrate reduction +0.1 +0.4 -0.1 -0.5 +0.5
denitrifying Nitrate reduction, replicate C t3 -0.2 +0.4 +0.3 -0.2 +0.2
carbon source carbon source Sucrose 1mM -0.2 -0.2 +0.0 -0.2 +1.0
nitrogen source D-Glucosamine Hydrochloride (N) -0.3 +0.5 +0.2 -0.4 +0.4
carbon source octanoate (C) -0.2 +0.4 +0.1 -0.2 +0.5
stress Dimethyl Sulfoxide 6.5 vol% -0.3 +0.4 +0.0 +0.2 +0.4
nitrogen source Cytosine (N) -0.2 +0.6 +0.2 +0.3 +0.1
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