Fitness for 5 genes in Pseudomonas fluorescens FW300-N1B4

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500 ntPf1N1B4_3434 and Pf1N1B4_3435 are separated by 27 nucleotidesPf1N1B4_3435 and Pf1N1B4_3436 are separated by 188 nucleotidesPf1N1B4_3436 and Pf1N1B4_3437 overlap by 24 nucleotidesPf1N1B4_3437 and Pf1N1B4_3438 are separated by 34 nucleotides Pf1N1B4_3434 - Succinylglutamate desuccinylase/aspartoacylase, at 3,827,089 to 3,828,201 _3434 Pf1N1B4_3435 - ABC transporter for L-Arginine and L-Citrulline, ATPase component (from data), at 3,828,229 to 3,828,993 _3435 Pf1N1B4_3436 - hypothetical protein, at 3,829,182 to 3,829,337 _3436 Pf1N1B4_3437 - Arginine pathway regulatory protein ArgR, repressor of arg regulon, at 3,829,314 to 3,830,219 _3437 Pf1N1B4_3438 - FIG00963434: hypothetical protein, at 3,830,254 to 3,835,287 _3438
Group Condition Pf1N1B4_3434 Pf1N1B4_3435 Pf1N1B4_3436 Pf1N1B4_3437 Pf1N1B4_3438
carbon source L-Citrulline (C) -1.6 -2.0 N.D. -3.0 -0.1
carbon source L-Arginine (C) -1.3 -2.1 N.D. -3.0 -0.1
nitrogen source L-Citrulline (N) -1.8 +0.1 N.D. -2.4 +0.0
nitrogen source L-Arginine (N) -0.3 -1.6 N.D. -0.8 -0.0
stress Thallium(I) acetate 0.008 mg/ml -0.6 -0.7 N.D. -0.5 -0.1
stress Thallium(I) acetate 0.008 mg/ml -0.5 -0.5 N.D. -0.6 -0.1
nitrogen source nitrogen source nitrite 0.1mM +0.5 -2.1 N.D. +0.1 -0.1
carbon source carbon source Sucrose 5mM -0.0 -0.8 N.D. -0.6 -0.1
carbon source carbon source Sucrose 0.25mM +0.4 -0.9 N.D. -0.1 -0.3
temperature LB 37C +0.5 -1.2 N.D. +0.6 -0.3
carbon source octanoate (C) -0.6 +1.1 N.D. -0.2 -0.1
carbon source L-Isoleucine (C) +0.1 +0.8 N.D. -0.7 +0.1
carbon source carbon source Sucrose 0.25mM +0.4 -0.8 N.D. +0.6 +0.0
stress Doxycycline hyclate 0.0001 mg/ml +0.2 +0.9 N.D. -0.6 +0.0
carbon source D-Trehalose (C) +0.1 -0.5 N.D. +0.9 +0.1
carbon source L-Leucine (C) -0.0 +1.1 N.D. -0.5 +0.1
nitrogen source Uridine (N) +0.5 +0.2 N.D. +0.8 -0.1
nitrogen source Adenine (N) +0.4 +0.7 N.D. +0.4 -0.1
carbon source L-Asparagine (C) +0.4 +0.8 N.D. +0.4 -0.0
nitrogen source L-Histidine (N) +0.2 +0.9 N.D. +0.4 +0.0
nitrogen source Cytidine (N) +0.5 +0.4 N.D. +0.7 -0.1
stress Aluminum chloride 2.5 mM +0.5 +0.9 N.D. +0.2 +0.1
stress nitrate 100 mM +0.4 +0.7 N.D. +0.5 +0.2
carbon source m-Inositol (C) +0.4 +0.8 N.D. +0.7 +0.0
carbon source Carnitine Hydrochloride (C) +0.4 +0.8 N.D. +0.8 +0.0
stress Sisomicin 0.001 mg/ml +0.2 +1.5 N.D. +0.4 +0.1
carbon source L-Valine (C) +0.4 +1.3 N.D. +0.6 +0.1
nitrogen source L-Methionine (N) +0.4 +1.2 N.D. +1.0 +0.1
pH Minimal media pH9 +1.0 +1.3 N.D. +1.6 -0.1
pH Minimal media pH9 +1.1 +1.7 N.D. +1.4 +0.2
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