Fitness for 5 genes in Pseudomonas fluorescens FW300-N1B4

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500 ntPf1N1B4_3433 and Pf1N1B4_3434 are separated by 1 nucleotidesPf1N1B4_3434 and Pf1N1B4_3435 are separated by 27 nucleotidesPf1N1B4_3435 and Pf1N1B4_3436 are separated by 188 nucleotidesPf1N1B4_3436 and Pf1N1B4_3437 overlap by 24 nucleotides Pf1N1B4_3433 - ABC transporter for L-Arginine and L-Citrulline, permease component 2 (from data), at 3,826,389 to 3,827,087 _3433 Pf1N1B4_3434 - Succinylglutamate desuccinylase/aspartoacylase, at 3,827,089 to 3,828,201 _3434 Pf1N1B4_3435 - ABC transporter for L-Arginine and L-Citrulline, ATPase component (from data), at 3,828,229 to 3,828,993 _3435 Pf1N1B4_3436 - hypothetical protein, at 3,829,182 to 3,829,337 _3436 Pf1N1B4_3437 - Arginine pathway regulatory protein ArgR, repressor of arg regulon, at 3,829,314 to 3,830,219 _3437
Group Condition Pf1N1B4_3433 Pf1N1B4_3434 Pf1N1B4_3435 Pf1N1B4_3436 Pf1N1B4_3437
carbon source L-Arginine (C) -2.7 -1.3 -2.1 N.D. -3.0
carbon source L-Citrulline (C) -2.3 -1.6 -2.0 N.D. -3.0
nitrogen source L-Citrulline (N) -1.2 -1.8 +0.1 N.D. -2.4
nitrogen source L-Arginine (N) -0.7 -0.3 -1.6 N.D. -0.8
stress Thallium(I) acetate 0.008 mg/ml -0.2 -0.6 -0.7 N.D. -0.5
stress D-Cycloserine 0.1 mg/ml -0.5 -0.2 -0.1 N.D. -1.1
nitrogen source nitrogen source nitrite 0.1mM -0.3 +0.5 -2.1 N.D. +0.1
stress Paraquat dichloride 0.016 mg/mL -0.8 -0.9 +0.4 N.D. +0.1
carbon source octanoate (C) -0.7 -0.6 +1.1 N.D. -0.2
temperature LB 37C +0.2 +0.5 -1.2 N.D. +0.6
carbon source L-Isoleucine (C) +0.4 +0.1 +0.8 N.D. -0.7
nitrogen source L-Lysine (N) -0.4 +1.2 +0.0 N.D. -0.3
carbon source carbon source Sucrose 0.25mM +0.4 +0.4 -0.8 N.D. +0.6
stress Doxycycline hyclate 0.0001 mg/ml +0.2 +0.2 +0.9 N.D. -0.6
carbon source D-Trehalose (C) +0.5 +0.1 -0.5 N.D. +0.9
carbon source L-Leucine (C) +0.4 -0.0 +1.1 N.D. -0.5
nitrogen source L-Isoleucine (N) +0.3 +0.4 +1.0 N.D. -0.2
stress Spectinomycin 0.05 mg/ml +0.5 +0.1 +0.7 N.D. +0.6
carbon source L-Asparagine (C) +0.4 +0.4 +0.8 N.D. +0.4
stress Gentamicin 0.001 mg/ml +0.5 +0.2 +1.0 N.D. +0.4
nitrogen source Cytidine (N) +0.4 +0.5 +0.4 N.D. +0.7
stress Aluminum chloride 2.5 mM +0.6 +0.5 +0.9 N.D. +0.2
stress nitrate 100 mM +0.7 +0.4 +0.7 N.D. +0.5
carbon source Carnitine Hydrochloride (C) +0.5 +0.4 +0.8 N.D. +0.8
carbon source m-Inositol (C) +0.7 +0.4 +0.8 N.D. +0.7
stress Sisomicin 0.001 mg/ml +0.7 +0.2 +1.5 N.D. +0.4
carbon source L-Valine (C) +0.6 +0.4 +1.3 N.D. +0.6
nitrogen source L-Methionine (N) +0.6 +0.4 +1.2 N.D. +1.0
pH Minimal media pH9 +1.3 +1.0 +1.3 N.D. +1.6
pH Minimal media pH9 +1.3 +1.1 +1.7 N.D. +1.4
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