Fitness for 5 genes in Pseudomonas fluorescens FW300-N1B4

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500 ntPf1N1B4_3415 and Pf1N1B4_3416 are separated by 215 nucleotidesPf1N1B4_3416 and Pf1N1B4_3417 are separated by 359 nucleotidesPf1N1B4_3417 and Pf1N1B4_3418 are separated by 138 nucleotidesPf1N1B4_3418 and Pf1N1B4_3419 are separated by 23 nucleotides Pf1N1B4_3415 - Transcriptional regulator, TetR family, at 3,805,049 to 3,805,657 _3415 Pf1N1B4_3416 - Outer membrane protein romA, at 3,805,873 to 3,806,931 _3416 Pf1N1B4_3417 - FIG00964635: hypothetical protein, at 3,807,291 to 3,807,608 _3417 Pf1N1B4_3418 - hypothetical protein, at 3,807,747 to 3,807,860 _3418 Pf1N1B4_3419 - Periplasmic beta-glucosidase (EC 3.2.1.21), at 3,807,884 to 3,810,175 _3419
Group Condition Pf1N1B4_3415 Pf1N1B4_3416 Pf1N1B4_3417 Pf1N1B4_3418 Pf1N1B4_3419
carbon source carbon source Sucrose 0.5mM -0.8 -1.3 N.D. N.D. +0.1
carbon source D-Lactate (C) -1.0 -0.1 N.D. N.D. -0.1
temperature LB 37C -1.2 -0.0 N.D. N.D. +0.0
denitrifying Nitrate reduction, replicate A -0.6 -0.6 N.D. N.D. +0.1
carbon source D-Lactate (C) -0.8 -0.3 N.D. N.D. -0.0
nitrogen source L-Isoleucine (N) -0.2 -0.8 N.D. N.D. +0.0
carbon source pyruvate (C) -0.6 -0.3 N.D. N.D. +0.1
carbon source carbon source Sucrose 0.25mM +0.2 -0.9 N.D. N.D. -0.1
carbon source carbon source Sucrose 0.25mM +0.3 -1.0 N.D. N.D. -0.1
stress Dimethyl Sulfoxide 6.5 vol% +0.2 -0.9 N.D. N.D. -0.1
carbon source L-Arginine (C) +0.3 -0.7 N.D. N.D. +0.0
lb LB +0.7 -0.9 N.D. N.D. -0.1
denitrifying Nitrate reduction, replicate A t1 +0.5 -0.5 N.D. N.D. -0.1
denitrifying Nitrate reduction in presence of wild-type Pseudomonas N2-E2; replicate B +0.5 -0.4 N.D. N.D. -0.1
denitrifying Nitrate reduction, replicate A t2 +0.6 -0.5 N.D. N.D. +0.0
carbon source carbon source Sucrose 1mM -0.6 +0.7 N.D. N.D. +0.0
stress nitrate 100 mM +0.7 -0.1 N.D. N.D. -0.3
nitrogen source L-Leucine (N) +0.6 -0.4 N.D. N.D. +0.1
denitrifying Nitrate reduction in presence of wild-type Pseudomonas N2-E2; replicate A +0.9 -0.2 N.D. N.D. -0.1
carbon source octanoate (C) +1.0 -0.3 N.D. N.D. -0.0
stress Sisomicin 0.001 mg/ml +1.1 -0.0 N.D. N.D. -0.1
stress methylglyoxal 0.004 vol% +0.7 +0.3 N.D. N.D. -0.0
stress methylglyoxal 0.008 vol% +1.0 -0.1 N.D. N.D. +0.2
stress Benzethonium chloride 0.0125 mM +1.0 +0.3 N.D. N.D. -0.0
anaerobic N2E2wt with N1B4m denitrifying repA +0.8 +0.4 N.D. N.D. +0.1
stress Fusidic 0.125 mg/ml +2.1 -0.9 N.D. N.D. +0.1
stress Nalidixic 0.004 mg/ml +1.6 +0.2 N.D. N.D. -0.2
stress Fusidic 0.0625 mg/ml +1.7 -0.2 N.D. N.D. +0.1
stress Doxycycline hyclate 0.0001 mg/ml +2.4 -0.1 N.D. N.D. +0.0
stress Carbenicillin 2 mg/ml +2.5 +0.5 N.D. N.D. -0.1
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