Private Fitness
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens FW300-N1B4
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 30 experiments (either direction), sorted by average fitness
Or view
all 191 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
Pf1N1B4_3269 and Pf1N1B4_3270 are separated by 156 nucleotides
Pf1N1B4_3270 and Pf1N1B4_3271 overlap by 4 nucleotides
Pf1N1B4_3271 and Pf1N1B4_3272 are separated by 19 nucleotides
Pf1N1B4_3272 and Pf1N1B4_3273 are separated by 79 nucleotides
Pf1N1B4_3269 - FIG00953317: hypothetical protein, at 3,658,930 to 3,659,949
_3269
Pf1N1B4_3270 - Alcohol dehydrogenase (EC 1.1.1.1), at 3,660,106 to 3,661,254
_3270
Pf1N1B4_3271 - Bicyclomycin resistance protein, at 3,661,251 to 3,662,417
_3271
Pf1N1B4_3272 - hypothetical protein, at 3,662,437 to 3,662,553
_3272
Pf1N1B4_3273 - Hydroxymethylglutaryl-CoA lyase (EC 4.1.3.4), at 3,662,633 to 3,662,893
_3273
Group
Condition
Pf1N1B4
_3269
Pf1N1B4
_3270
Pf1N1B4
_3271
Pf1N1B4
_3272
Pf1N1B4
_3273
carbon source
carbon source Sucrose 1mM
-0.3
-0.5
+0.3
-1.1
-3.6
carbon source
carbon source Sucrose 0.25mM
+0.3
+0.1
-0.1
-0.8
-3.4
anaerobic
Nitrate reduction
+0.4
-0.2
-0.3
-2.4
+0.3
temperature
LB 37C
-0.0
-0.8
-1.2
-0.6
+0.4
stress
Aluminum chloride 2.5 mM
-0.2
-0.4
-0.4
-0.0
-1.2
pH
Minimal media pH9
-0.4
+0.1
+0.3
-0.8
-1.1
carbon source
carbon source Sucrose 0.5mM
+0.2
-0.0
-0.7
-0.8
-0.3
nitrogen source
nitrogen source nitrite 0.5mM
+0.1
+0.2
-0.4
-0.4
-0.8
nitrogen source
Thymine (N)
+0.1
+0.5
-0.2
-0.5
-1.0
stress
Cisplatin 0.006 mg/ml
-0.2
+0.4
-0.6
-0.4
-0.4
stress
Carbenicillin 2 mg/ml
+0.0
-0.5
-0.8
+0.4
-0.0
carbon source
D-Mannose (C)
+0.1
-0.4
-0.1
+0.4
-0.8
nitrogen source
Uridine (N)
-0.1
+0.4
-0.1
+0.4
-1.4
temperature
LB 37C
-0.7
-0.3
-0.2
-0.5
+1.1
stress
Chloride 200 mM
+0.2
-0.1
-0.1
-1.0
+0.5
carbon source
carbon source Sucrose 0.25mM
+0.5
+0.0
-0.2
+0.0
-1.0
stress
1-ethyl-3-methylimidazolium lysine 5 mM
-0.3
-0.1
+0.1
-0.8
+0.8
stress
nitrite 10 mM
-0.0
-0.3
-0.4
+1.0
-0.6
denitrifying
Nitrate reduction, replicate A
+0.1
+0.8
-0.1
-0.1
-1.0
carbon source
D-Galactose (C)
-0.1
+0.0
-0.2
-0.5
+1.0
nitrogen source
nitrogen source nitrite 1mM
+0.1
+0.3
-0.2
-0.5
+0.7
stress
Cholin acetate 20 mM
+0.2
+0.2
-0.3
-0.4
+0.9
denitrifying
Nitrate reduction, replicate B t1
+0.2
+0.5
-0.1
+0.5
-0.4
nitrogen source
D-Glucosamine Hydrochloride (N)
+0.3
-0.3
-0.2
-0.4
+1.3
denitrifying
Nitrate reduction, replicate C t3
+0.4
+0.8
+0.2
-0.6
+0.2
denitrifying
Denitrifying in presence of WT Pseudomonas N2-E3; replicate B; timepoint 1
+0.0
+1.4
-0.1
-0.3
-0.1
carbon source
carbon source Sucrose 5mM
+0.1
+0.6
+0.2
-0.5
+0.6
denitrifying
Nitrate reduction, replicate A t2
+0.4
+1.3
-0.1
-0.6
-0.0
stress
Doxycycline hyclate 0.0001 mg/ml
+0.1
+0.2
+0.2
+1.4
-0.7
denitrifying
Denitrifying in presence of WT Pseudomonas N2-E3; replicate C; timepoint 1
+0.1
+1.0
-0.3
+0.5
+0.6
remove
Pf1N1B4_3269
plot
remove
Pf1N1B4_3270
plot
remove
Pf1N1B4_3271
remove
Pf1N1B4_3272
plot
remove
Pf1N1B4_3273
plot