Fitness for 5 genes in Pseudomonas fluorescens FW300-N1B4

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500 ntPf1N1B4_3244 and Pf1N1B4_3245 are separated by 146 nucleotidesPf1N1B4_3245 and Pf1N1B4_3246 overlap by 1 nucleotidesPf1N1B4_3246 and Pf1N1B4_3247 are separated by 3 nucleotidesPf1N1B4_3247 and Pf1N1B4_3248 are separated by 265 nucleotides Pf1N1B4_3244 - NADH oxidase, at 3,630,193 to 3,632,148 _3244 Pf1N1B4_3245 - RND efflux system, outer membrane lipoprotein, NodT family, at 3,632,295 to 3,633,755 _3245 Pf1N1B4_3246 - RND efflux system, inner membrane transporter CmeB, at 3,633,755 to 3,636,916 _3246 Pf1N1B4_3247 - Multidrug efflux RND membrane fusion protein MexC, at 3,636,920 to 3,638,077 _3247 Pf1N1B4_3248 - Transcription repressor of multidrug efflux pump acrAB operon, TetR (AcrR) family, at 3,638,343 to 3,638,975 _3248
Group Condition Pf1N1B4_3244 Pf1N1B4_3245 Pf1N1B4_3246 Pf1N1B4_3247 Pf1N1B4_3248
stress copper (II) chloride 2.5 mM -0.2 N.D. -3.1 N.D. +0.1
stress Cephalothin 2.5 mg/ml -0.1 N.D. -1.9 N.D. -0.6
stress Benzethonium chloride 0.0125 mM -0.1 N.D. -2.5 N.D. +0.3
stress nitrite 10 mM -0.5 N.D. -0.3 N.D. -1.6
stress Spectinomycin 0.05 mg/ml -0.2 N.D. -2.2 N.D. +0.6
stress copper (II) chloride 2.5 mM +0.2 N.D. -2.5 N.D. +0.5
stress Tetracycline 0.0004 mg/ml -0.3 N.D. -3.3 N.D. +2.0
stress Gentamicin 0.001 mg/ml +0.2 N.D. -1.9 N.D. +0.2
stress Sisomicin 0.001 mg/ml -0.2 N.D. -2.0 N.D. +0.6
denitrifying Nitrate reduction, replicate B +0.2 N.D. -0.3 N.D. -1.0
stress Fusidic 0.0625 mg/ml -0.2 N.D. -2.9 N.D. +2.4
nitrogen source Putrescine (N) -0.2 N.D. -0.8 N.D. +0.4
carbon source carbon source Sucrose 0.5mM -1.1 N.D. +1.3 N.D. -0.8
stress Nalidixic 0.004 mg/ml -0.2 N.D. -2.6 N.D. +2.2
stress Choline Lysine 6 mM -0.0 N.D. -1.0 N.D. +0.8
carbon source octanoate (C) +0.1 N.D. -1.9 N.D. +1.6
stress Choline chloride 200 mM -0.0 N.D. -1.3 N.D. +1.2
stress Chloride 300 mM -0.1 N.D. -0.6 N.D. +0.8
stress Thallium(I) acetate 0.008 mg/ml +0.0 N.D. +1.5 N.D. -1.4
carbon source carbon source Sucrose 1mM -0.0 N.D. +1.1 N.D. -0.9
stress Thallium(I) acetate 0.008 mg/ml +0.0 N.D. +1.4 N.D. -1.3
carbon source carbon source Sucrose 1mM +0.3 N.D. +1.1 N.D. -1.3
stress Cobalt chloride 0.3125 mM +0.2 N.D. -0.8 N.D. +0.7
stress Carbenicillin 2 mg/ml -0.4 N.D. -2.4 N.D. +3.1
carbon source carbon source Sucrose 0.25mM +0.4 N.D. +1.4 N.D. -0.9
carbon source carbon source Sucrose 0.25mM +0.1 N.D. +1.8 N.D. -1.1
denitrifying Nitrate reduction in presence of wild-type Pseudomonas N2-E2; replicate B +0.2 N.D. +0.6 N.D. +0.7
stress Doxycycline hyclate 0.0001 mg/ml -0.3 N.D. -2.4 N.D. +4.6
stress 5-Hydroxymethylfurfural 2.5 mM +0.0 N.D. +0.2 N.D. +1.8
stress Fusidic 0.125 mg/ml -0.1 N.D. -1.8 N.D. +4.1
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