Fitness for 5 genes in Pseudomonas fluorescens FW300-N1B4

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500 ntPf1N1B4_3146 and Pf1N1B4_3147 are separated by 0 nucleotidesPf1N1B4_3147 and Pf1N1B4_3148 are separated by 189 nucleotidesPf1N1B4_3148 and Pf1N1B4_3149 are separated by 87 nucleotidesPf1N1B4_3149 and Pf1N1B4_3150 are separated by 23 nucleotides Pf1N1B4_3146 - FIG00957354: hypothetical protein, at 3,528,929 to 3,529,123 _3146 Pf1N1B4_3147 - Putative NADPH-quinone reductase (modulator of drug activity B), at 3,529,124 to 3,529,549 _3147 Pf1N1B4_3148 - FIG074102: hypothetical protein, at 3,529,739 to 3,530,482 _3148 Pf1N1B4_3149 - hypothetical protein, at 3,530,570 to 3,530,698 _3149 Pf1N1B4_3150 - Transcriptional regulator, LuxR family, at 3,530,722 to 3,531,372 _3150
Group Condition Pf1N1B4_3146 Pf1N1B4_3147 Pf1N1B4_3148 Pf1N1B4_3149 Pf1N1B4_3150
stress Benzethonium chloride 0.0125 mM N.D. -1.9 -0.4 -0.4 N.D.
stress Rifampicin 0.004 mg/ml N.D. -2.7 +0.3 -0.2 N.D.
stress Doxycycline hyclate 0.0001 mg/ml N.D. -1.9 +0.4 -0.8 N.D.
carbon source octanoate (C) N.D. -2.6 +0.1 +0.2 N.D.
anaerobic Nitrate reduction N.D. -0.3 -0.1 -1.8 N.D.
denitrifying Denitrifying in presence of WT Pseudomonas N2-E3; replicate B; timepoint 1 N.D. +0.2 -0.6 -1.3 N.D.
carbon source Carnitine Hydrochloride (C) N.D. +0.3 +0.2 -1.5 N.D.
denitrifying Denitrifying in presence of WT Pseudomonas N2-E3; replicate C; timepoint 1 N.D. +0.4 -0.6 -0.4 N.D.
stress nitrite 10 mM N.D. -0.1 +0.4 -0.7 N.D.
stress Carbenicillin 2 mg/ml N.D. -0.9 +0.1 +0.4 N.D.
temperature LB 37C N.D. +0.4 +0.1 -0.8 N.D.
carbon source carbon source Sucrose 0.5mM N.D. +0.8 +0.7 -1.7 N.D.
stress Fusidic 0.0625 mg/ml N.D. -1.0 +0.2 +0.7 N.D.
carbon source L-Leucine (C) N.D. +0.6 +0.2 -0.8 N.D.
stress Gentamicin 0.001 mg/ml N.D. +0.4 +0.5 -0.7 N.D.
carbon source carbon source Sucrose 1mM N.D. +1.1 +0.3 -1.2 N.D.
pH Minimal media pH9 N.D. +1.0 +0.1 -0.8 N.D.
stress 1-ethyl-3-methylimidazolium chloride 80 mM N.D. +0.5 +0.5 -0.5 N.D.
carbon source carbon source Sucrose 1mM N.D. +1.0 +1.1 -1.3 N.D.
pH Minimal media pH9 N.D. +0.6 +0.6 -0.4 N.D.
stress Sisomicin 0.001 mg/ml N.D. +0.6 +0.5 -0.2 N.D.
carbon source carbon source Sucrose 0.25mM N.D. +1.2 -0.1 -0.0 N.D.
nitrogen source L-Methionine (N) N.D. +0.0 -0.2 +1.2 N.D.
stress Fusidic 0.125 mg/ml N.D. -0.0 +0.4 +0.9 N.D.
stress D-Cycloserine 0.1 mg/ml N.D. -0.2 +0.7 +0.9 N.D.
stress methylglyoxal 0.008 vol% N.D. +0.1 +1.0 +0.4 N.D.
temperature LB 37C N.D. +0.8 +0.7 +0.1 N.D.
carbon source carbon source Sucrose 0.25mM N.D. +1.1 -0.1 +0.7 N.D.
stress nitrate 100 mM N.D. +0.9 +0.7 +0.1 N.D.
stress Aluminum chloride 2.5 mM N.D. +1.1 +0.2 +0.5 N.D.
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