Fitness for 5 genes in Pseudomonas fluorescens FW300-N1B4

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500 ntPf1N1B4_3124 and Pf1N1B4_3125 overlap by 4 nucleotidesPf1N1B4_3125 and Pf1N1B4_3126 are separated by 127 nucleotidesPf1N1B4_3126 and Pf1N1B4_3127 overlap by 14 nucleotidesPf1N1B4_3127 and Pf1N1B4_3128 are separated by 3 nucleotides Pf1N1B4_3124 - Phage tail tube protein, at 3,510,152 to 3,510,499 _3124 Pf1N1B4_3125 - FIG00954242: hypothetical protein, at 3,510,496 to 3,510,792 _3125 Pf1N1B4_3126 - Phage tail length tape-measure protein, at 3,510,920 to 3,512,692 _3126 Pf1N1B4_3127 - Phage tail/DNA circulation protein, at 3,512,679 to 3,513,917 _3127 Pf1N1B4_3128 - FIG003269: Prophage tail protein, at 3,513,921 to 3,514,964 _3128
Group Condition Pf1N1B4_3124 Pf1N1B4_3125 Pf1N1B4_3126 Pf1N1B4_3127 Pf1N1B4_3128
temperature LB 37C -0.1 -0.5 -1.9 -0.8 -0.2
stress nitrate 100 mM +0.4 -0.8 -0.8 -0.7 -0.3
anaerobic N2E2wt with N1B4m denitrifying repA -0.2 -0.3 -0.2 -1.4 -0.1
carbon source carbon source Sucrose 1mM -0.5 -1.0 -0.2 -0.1 -0.1
pH Minimal media pH9 +0.3 -0.8 -0.2 -0.6 -0.2
stress Tetracycline 0.0004 mg/ml -0.5 -0.3 -0.8 -0.1 +0.1
nitrogen source nitrogen source nitrite 0.1mM +0.3 -0.9 +0.4 -0.7 -0.5
stress Nalidixic 0.004 mg/ml -0.7 +0.3 -0.4 -0.6 +0.1
stress Aluminum chloride 2.5 mM +0.1 -0.2 +0.2 -1.3 +0.0
stress nitrite 10 mM +0.1 +0.7 -0.8 -0.8 -0.2
nitrogen source nitrogen source nitrate 5mM -0.0 -0.6 -0.5 +0.5 -0.3
carbon source L-Isoleucine (C) +0.3 -0.1 +0.3 -1.1 -0.3
carbon source carbon source Sucrose 1mM -1.3 +0.0 +0.9 -0.2 +0.0
carbon source D-Gluconic Acid (C) +0.2 +0.3 -1.3 +0.2 +0.1
stress Dimethyl Sulfoxide 6.5 vol% +0.4 -0.7 +0.3 -0.2 -0.3
carbon source carbon source Sucrose 0.25mM +0.7 +0.1 +0.0 -1.1 +0.0
stress Cisplatin 0.006 mg/ml -0.2 +0.3 -0.8 +0.3 +0.1
carbon source D-Fructose (C) +0.4 +0.4 -0.2 -0.7 -0.1
nitrogen source D-Glucosamine Hydrochloride (N) +0.9 -0.6 -0.7 +0.3 +0.1
denitrifying Nitrate reduction, replicate A t2 +0.4 +0.2 -0.9 +0.5 -0.1
denitrifying Denitrifying in presence of WT Pseudomonas N2-E3; replicate B; timepoint 1 +0.6 +0.5 -0.3 -0.3 -0.1
nitrogen source nitrogen source nitrite 0.1mM -0.1 -0.3 +0.7 +0.5 -0.4
denitrifying Denitrifying in presence of WT Pseudomonas N2-E3; replicate C; timepoint 1 -0.1 +0.6 +0.1 -0.6 +0.4
nitrogen source nitrogen source Ammonium chloride 20mM -0.3 -0.3 +0.4 +0.7 -0.0
carbon source carbon source Sucrose 0.25mM +0.5 +0.5 +0.7 -0.3 -0.5
stress Benzethonium chloride 0.0125 mM +1.0 -0.1 -0.2 +0.5 -0.1
stress copper (II) chloride 2.5 mM +0.3 +0.5 +0.6 -0.2 +0.4
denitrifying Nitrate reduction, replicate C t1 +0.4 +0.3 +0.4 +0.7 -0.1
denitrifying Nitrate reduction, replicate C t2 +0.7 +0.4 +0.1 +0.4 +0.2
carbon source L-Arabinose (C) +0.3 +0.2 +0.8 +0.4 +0.3
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