Fitness for 5 genes in Pseudomonas fluorescens FW300-N1B4

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500 ntPf1N1B4_3090 and Pf1N1B4_3091 are separated by 67 nucleotidesPf1N1B4_3091 and Pf1N1B4_3092 are separated by 72 nucleotidesPf1N1B4_3092 and Pf1N1B4_3093 are separated by 45 nucleotidesPf1N1B4_3093 and Pf1N1B4_3094 are separated by 3 nucleotides Pf1N1B4_3090 - 1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC 1.1.1.267), at 3,472,618 to 3,473,808 _3090 Pf1N1B4_3091 - Membrane-associated zinc metalloprotease, at 3,473,876 to 3,475,213 _3091 Pf1N1B4_3092 - Outer membrane protein assembly factor YaeT precursor, at 3,475,286 to 3,477,676 _3092 Pf1N1B4_3093 - Outer membrane protein H precursor, at 3,477,722 to 3,478,225 _3093 Pf1N1B4_3094 - UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase (EC 2.3.1.191), at 3,478,229 to 3,479,284 _3094
Group Condition Pf1N1B4_3090 Pf1N1B4_3091 Pf1N1B4_3092 Pf1N1B4_3093 Pf1N1B4_3094
stress Rifampicin 0.004 mg/ml N.D. -3.3 N.D. -2.1 N.D.
stress Carbenicillin 2 mg/ml N.D. -2.0 N.D. -3.3 N.D.
carbon source octanoate (C) N.D. -2.0 N.D. -3.2 N.D.
stress Spectinomycin 0.05 mg/ml N.D. -1.9 N.D. -3.0 N.D.
stress Doxycycline hyclate 0.0001 mg/ml N.D. -2.1 N.D. -2.5 N.D.
denitrifying Nitrate reduction, replicate C N.D. -3.1 N.D. -1.0 N.D.
denitrifying Nitrate reduction, replicate A N.D. -2.3 N.D. -1.5 N.D.
stress Fusidic 0.125 mg/ml N.D. -0.9 N.D. -2.8 N.D.
stress Bacitracin 2 mg/ml N.D. -1.2 N.D. -2.2 N.D.
stress Benzethonium chloride 0.0125 mM N.D. -0.6 N.D. -2.8 N.D.
stress Fusidic 0.0625 mg/ml N.D. -0.3 N.D. -3.0 N.D.
stress Chloride 300 mM N.D. -1.0 N.D. -2.1 N.D.
temperature LB 10C N.D. -0.6 N.D. -2.4 N.D.
stress Nalidixic 0.004 mg/ml N.D. +0.0 N.D. -3.0 N.D.
stress Chlorite 1 mM N.D. -2.0 N.D. -0.6 N.D.
stress Cisplatin 0.006 mg/ml N.D. -2.6 N.D. +0.0 N.D.
stress Cisplatin 0.006 mg/ml N.D. -1.6 N.D. -0.8 N.D.
stress Cephalothin 2.5 mg/ml N.D. -0.6 N.D. -1.8 N.D.
stress Cholin acetate 20 mM N.D. -0.9 N.D. -1.5 N.D.
temperature LB 20C N.D. -0.4 N.D. -2.0 N.D.
denitrifying Nitrate reduction, replicate B N.D. -2.2 N.D. +0.3 N.D.
pH Minimal media pH9 N.D. -2.3 N.D. +0.4 N.D.
denitrifying Nitrate reduction, replicate B t1 N.D. -1.4 N.D. +1.0 N.D.
denitrifying Nitrate reduction, replicate A t2 N.D. -1.6 N.D. +1.2 N.D.
denitrifying Nitrate reduction, replicate B t2 N.D. -1.4 N.D. +1.1 N.D.
anaerobic Nitrate reduction N.D. -1.4 N.D. +1.1 N.D.
denitrifying Nitrate reduction, replicate C t3 N.D. -1.6 N.D. +1.4 N.D.
denitrifying Nitrate reduction, replicate C t1 N.D. -0.8 N.D. +1.5 N.D.
carbon source carbon source Sucrose 0.5mM N.D. +1.6 N.D. -0.8 N.D.
carbon source carbon source Sucrose 0.25mM N.D. +1.7 N.D. -0.7 N.D.
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