Fitness for 5 genes in Pseudomonas fluorescens FW300-N1B4

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500 ntPf1N1B4_307 and Pf1N1B4_308 are separated by 247 nucleotidesPf1N1B4_308 and Pf1N1B4_309 are separated by 44 nucleotidesPf1N1B4_309 and Pf1N1B4_310 are separated by 245 nucleotidesPf1N1B4_310 and Pf1N1B4_311 are separated by 141 nucleotides Pf1N1B4_307 - TesB-like acyl-CoA thioesterase 1, at 360,835 to 361,632 _307 Pf1N1B4_308 - FIG00956090: hypothetical protein, at 361,880 to 362,647 _308 Pf1N1B4_309 - Phosphonate ABC transporter phosphate-binding periplasmic component (TC 3.A.1.9.1), at 362,692 to 362,970 _309 Pf1N1B4_310 - UPF0028 protein YchK, at 363,216 to 364,256 _310 Pf1N1B4_311 - sensor histidine kinase, at 364,398 to 365,096 _311
Group Condition Pf1N1B4_307 Pf1N1B4_308 Pf1N1B4_309 Pf1N1B4_310 Pf1N1B4_311
carbon source carbon source Sucrose 1mM -1.1 +0.7 -1.0 -0.8 -0.1
nitrogen source nitrogen source nitrite 0.5mM +0.2 -0.3 -0.6 -0.4 -0.5
stress Choline Lysine 6 mM -0.2 +0.3 -0.8 -0.4 -0.5
carbon source carbon source Sucrose 0.25mM +0.0 -0.7 +0.2 -0.5 -0.4
temperature LB 37C +0.4 -0.4 -1.6 -0.1 +0.2
carbon source L-Lactate (C) +0.2 -0.3 -0.7 -0.4 -0.0
nitrogen source nitrogen source nitrite 0.1mM -0.5 +0.8 -0.0 -1.0 -0.4
nitrogen source Thymine (N) +0.3 -1.0 +0.0 -0.5 +0.0
denitrifying Nitrate reduction, replicate C -0.2 -0.5 -0.5 +0.3 +0.0
stress Aluminum chloride 2.5 mM -0.2 +0.6 -0.5 -0.5 -0.1
carbon source carbon source Sucrose 0.5mM +0.6 -0.1 +0.0 -0.2 -0.7
carbon source D-Galactose (C) +0.2 +0.2 -0.8 -0.2 +0.3
carbon source carbon source Sucrose 0.25mM +0.0 +0.2 -0.6 -0.4 +0.4
carbon source D-Fructose (C) +0.4 -0.0 -0.7 -0.3 +0.4
carbon source m-Inositol (C) +0.4 +0.2 -0.2 -0.7 -0.0
stress copper (II) chloride 2.5 mM -0.1 +0.7 -0.9 -0.0 +0.3
stress Cisplatin 0.006 mg/ml -0.2 +0.0 +0.9 -0.2 -0.3
anaerobic N2E2wt with N1B4m denitrifying repA -0.1 +0.4 +0.5 -0.4 -0.2
carbon source L-Lactate (C) +0.3 +0.3 -0.5 -0.1 +0.4
carbon source D-Ribose (C) +0.2 +0.4 -0.3 -0.2 +0.4
carbon source Fumarate (C) +0.4 +0.3 -0.5 +0.1 +0.3
stress Chloride 300 mM +0.3 +0.2 -0.6 +0.3 +0.3
carbon source carbon source Sucrose 5mM +0.5 +0.3 +0.3 +0.1 -0.7
carbon source D-Glucose (C) +0.2 +0.6 -0.5 -0.0 +0.4
denitrifying Denitrifying in presence of WT Pseudomonas N2-E3; replicate C; timepoint 1 +0.5 +0.2 -0.4 -0.1 +0.5
stress copper (II) chloride 2.5 mM +0.3 +0.5 -0.3 -0.1 +0.4
carbon source D-Trehalose (C) +0.4 +0.6 +0.1 -0.5 +0.2
carbon source D-Fructose (C) +0.6 +0.4 +0.1 -0.2 +0.3
pH Minimal media pH9 +0.6 +0.1 +0.7 +0.1 -0.1
stress Benzethonium chloride 0.0125 mM +0.3 +0.3 +0.1 +0.5 +0.5
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