Fitness for 5 genes in Pseudomonas fluorescens FW300-N1B4

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500 ntPf1N1B4_3018 and Pf1N1B4_3019 are separated by 146 nucleotidesPf1N1B4_3019 and Pf1N1B4_3020 are separated by 66 nucleotidesPf1N1B4_3020 and Pf1N1B4_3021 are separated by 356 nucleotidesPf1N1B4_3021 and Pf1N1B4_3022 are separated by 210 nucleotides Pf1N1B4_3018 - L-carnitine dehydratase/bile acid-inducible protein F (EC 2.8.3.16), at 3,393,260 to 3,394,459 _3018 Pf1N1B4_3019 - YaeQ protein, at 3,394,606 to 3,395,148 _3019 Pf1N1B4_3020 - Single-stranded-DNA-specific exonuclease RecJ (EC 3.1.-.-), at 3,395,215 to 3,396,924 _3020 Pf1N1B4_3021 - NADH:flavin oxidoreductases, Old Yellow Enzyme family, at 3,397,281 to 3,398,387 _3021 Pf1N1B4_3022 - Glucans biosynthesis protein D precursor, at 3,398,598 to 3,400,223 _3022
Group Condition Pf1N1B4_3018 Pf1N1B4_3019 Pf1N1B4_3020 Pf1N1B4_3021 Pf1N1B4_3022
nitrogen source D-Glucosamine Hydrochloride (N) -0.1 N.D. -0.9 -0.4 -0.1
carbon source carbon source Sucrose 0.25mM -0.6 N.D. -0.9 +0.2 -0.2
stress Dimethyl Sulfoxide 6.5 vol% -0.4 N.D. -1.0 +0.0 +0.0
stress Sisomicin 0.001 mg/ml -0.5 N.D. -0.6 -0.2 -0.0
temperature LB 37C -0.1 N.D. -0.5 -0.4 -0.2
carbon source carbon source Sucrose 1mM +0.2 N.D. -0.8 -0.6 +0.1
stress 1-ethyl-3-methylimidazolium chloride 80 mM +0.0 N.D. -1.0 -0.1 +0.1
nitrogen source nitrogen source nitrate 20mM +0.1 N.D. -1.0 -0.2 +0.0
stress Aluminum chloride 2.5 mM -0.4 N.D. -0.7 +0.2 -0.2
carbon source carbon source Sucrose 1mM -0.4 N.D. +0.2 -0.5 -0.1
stress Fusidic 0.125 mg/ml +0.1 N.D. -0.3 -0.4 -0.3
carbon source L-Histidine (C) -0.2 N.D. -0.8 +0.1 +0.1
stress D-Cycloserine 0.1 mg/ml +0.2 N.D. -0.7 -0.3 -0.0
temperature LB 37C -0.9 N.D. +0.1 +0.3 -0.3
stress Doxycycline hyclate 0.0001 mg/ml -0.4 N.D. -0.3 -0.3 +0.2
carbon source L-Valine (C) -0.5 N.D. -0.3 +0.3 -0.2
stress Cephalothin 2.5 mg/ml -0.1 N.D. -0.8 +0.3 +0.1
stress Dimethyl Sulfoxide 5 vol% +0.2 N.D. -0.7 +0.2 -0.1
stress Cisplatin 0.006 mg/ml -0.1 N.D. -0.7 +0.2 +0.1
lb LB +0.1 N.D. -0.8 +0.2 +0.1
nitrogen source Cytidine (N) -0.7 N.D. -0.1 +0.3 +0.1
stress Thallium(I) acetate 0.008 mg/ml -0.3 N.D. +0.5 -0.3 -0.1
carbon source carbon source Sucrose 5mM +0.2 N.D. -0.8 +0.4 +0.0
carbon source carbon source Sucrose 0.25mM -0.7 N.D. +0.3 +0.3 +0.0
stress copper (II) chloride 2.5 mM -0.1 N.D. +0.7 -0.3 +0.2
stress sodium fluoride 12.5 mM -0.2 N.D. +0.7 -0.1 +0.3
carbon source D-Lactate (C) -0.1 N.D. +0.7 -0.2 +0.3
denitrifying Denitrifying in presence of WT Pseudomonas N2-E3; replicate C; timepoint 1 -0.2 N.D. +1.0 -0.3 +0.2
denitrifying Nitrate reduction, replicate B t2 -0.1 N.D. +0.5 +0.3 +0.2
denitrifying Nitrate reduction, replicate B t1 -0.0 N.D. +0.8 +0.1 +0.3
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