Fitness for 5 genes in Pseudomonas fluorescens FW300-N1B4

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500 ntPf1N1B4_296 and Pf1N1B4_297 overlap by 1 nucleotidesPf1N1B4_297 and Pf1N1B4_298 are separated by 91 nucleotidesPf1N1B4_298 and Pf1N1B4_299 are separated by 67 nucleotidesPf1N1B4_299 and Pf1N1B4_300 overlap by 4 nucleotides Pf1N1B4_296 - ABC transporter ATP-binding protein YvcR, at 349,292 to 349,975 _296 Pf1N1B4_297 - FIG00809136: hypothetical protein, at 349,975 to 352,479 _297 Pf1N1B4_298 - Transcription elongation factor GreB, at 352,571 to 353,044 _298 Pf1N1B4_299 - HIPA PROTEIN, at 353,112 to 354,389 _299 Pf1N1B4_300 - hypothetical protein, at 354,386 to 354,505 _300
Group Condition Pf1N1B4_296 Pf1N1B4_297 Pf1N1B4_298 Pf1N1B4_299 Pf1N1B4_300
stress Rifampicin 0.004 mg/ml -1.4 -0.2 -0.3 -0.3 N.D.
carbon source octanoate (C) -0.7 -0.5 -0.2 -0.5 N.D.
nophagecontrol TIme6-nophage +0.0 +0.0 -1.3 -0.1 N.D.
nophagecontrol Time16-nophage -0.2 +0.1 -1.0 -0.2 N.D.
stress Cholin acetate 20 mM +0.2 +0.1 -1.3 +0.1 N.D.
phagefrs Time6-FRS +0.2 +0.0 -1.2 -0.0 N.D.
stress Spectinomycin 0.025 mg/ml +0.1 +0.0 -1.1 +0.3 N.D.
nitrogen source Cytidine (N) +0.4 +0.3 -0.9 -0.1 N.D.
pH Minimal media pH6 +0.5 +0.3 -1.0 +0.0 N.D.
carbon source carbon source Sucrose 0.5mM +1.1 +0.3 -2.0 +0.5 N.D.
carbon source D-Fructose (C) +0.5 +0.2 -0.7 -0.1 N.D.
temperature LB 30C +0.4 +0.3 -0.6 +0.1 N.D.
carbon source L-Leucine (C) +0.5 +0.3 -0.7 +0.0 N.D.
carbon source carbon source Sucrose 20mM +0.7 +0.3 -0.3 +0.1 N.D.
stress 1-ethyl-3-methylimidazolium lysine 5 mM +0.4 +0.4 -0.3 +0.4 N.D.
pH Minimal media pH9 +0.8 +0.6 -0.3 -0.2 N.D.
denitrifying Nitrate reduction, replicate A t1 +1.0 +0.2 -0.4 +0.2 N.D.
denitrifying Nitrate reduction, replicate A t2 +1.1 +0.2 -0.2 +0.2 N.D.
denitrifying Nitrate reduction, replicate B +0.7 +0.1 +0.5 +0.2 N.D.
stress 1-ethyl-3-methylimidazolium chloride 80 mM +0.4 +0.3 +0.7 +0.2 N.D.
denitrifying Denitrifying in presence of WT Pseudomonas N2-E3; replicate B; timepoint 1 +0.8 +0.2 +0.7 -0.1 N.D.
stress methylglyoxal 0.008 vol% +0.5 +0.2 +0.6 +0.3 N.D.
stress Sisomicin 0.001 mg/ml +0.4 +0.5 +0.3 +0.5 N.D.
stress Choline chloride 200 mM +0.3 +0.6 +0.5 +0.3 N.D.
carbon source carbon source Sucrose 1mM +0.9 +0.6 -0.4 +0.6 N.D.
stress Cisplatin 0.006 mg/ml +0.7 +0.5 +0.1 +0.4 N.D.
stress Cisplatin 0.006 mg/ml +1.4 +0.6 -0.7 +0.5 N.D.
carbon source carbon source Sucrose 0.25mM +1.0 +0.4 +0.3 +0.4 N.D.
stress nitrate 100 mM +0.9 +0.8 +0.4 +0.3 N.D.
carbon source carbon source Sucrose 1mM +1.1 +0.6 +0.6 +0.2 N.D.
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