Fitness for 5 genes in Pseudomonas fluorescens FW300-N1B4

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500 ntPf1N1B4_2964 and Pf1N1B4_2965 are separated by 168 nucleotidesPf1N1B4_2965 and Pf1N1B4_2966 are separated by 313 nucleotidesPf1N1B4_2966 and Pf1N1B4_2967 are separated by 145 nucleotidesPf1N1B4_2967 and Pf1N1B4_2968 are separated by 24 nucleotides Pf1N1B4_2964 - Outer membrane protein assembly factor YaeT precursor, at 3,325,580 to 3,326,302 _2964 Pf1N1B4_2965 - hypothetical protein, at 3,326,471 to 3,327,412 _2965 Pf1N1B4_2966 - FIG00958649: hypothetical protein, at 3,327,726 to 3,328,160 _2966 Pf1N1B4_2967 - Alpha/beta hydrolase, at 3,328,306 to 3,328,938 _2967 Pf1N1B4_2968 - Tryptophanyl-tRNA synthetase (EC 6.1.1.2), at 3,328,963 to 3,330,318 _2968
Group Condition Pf1N1B4_2964 Pf1N1B4_2965 Pf1N1B4_2966 Pf1N1B4_2967 Pf1N1B4_2968
nitrogen source L-Valine (N) -0.2 N.D. N.D. -0.7 N.D.
pH Minimal media pH6 -0.6 N.D. N.D. -0.3 N.D.
denitrifying Denitrifying in presence of WT Pseudomonas N2-E3; replicate C; timepoint 1 -0.7 N.D. N.D. +0.0 N.D.
stress Thallium(I) acetate 0.008 mg/ml -0.3 N.D. N.D. -0.4 N.D.
stress D-Cycloserine 0.1 mg/ml -0.1 N.D. N.D. -0.6 N.D.
stress Rifampicin 0.004 mg/ml -0.3 N.D. N.D. -0.3 N.D.
denitrifying Nitrate reduction, replicate A -0.9 N.D. N.D. +0.2 N.D.
stress nitrite 10 mM +0.1 N.D. N.D. -0.7 N.D.
carbon source D-Lactate (C) +0.1 N.D. N.D. -0.6 N.D.
temperature LB 37C +0.1 N.D. N.D. -0.6 N.D.
carbon source carbon source Sucrose 0.5mM -0.7 N.D. N.D. +0.3 N.D.
carbon source L-Malic (C) +0.3 N.D. N.D. -0.5 N.D.
nitrogen source nitrogen source nitrite 0.5mM +0.3 N.D. N.D. -0.4 N.D.
denitrifying Nitrate reduction, replicate B t1 +0.3 N.D. N.D. -0.3 N.D.
carbon source carbon source Sucrose 0.25mM +0.4 N.D. N.D. -0.3 N.D.
denitrifying Nitrate reduction, replicate C +0.6 N.D. N.D. -0.1 N.D.
carbon source carbon source Sucrose 0.25mM +0.4 N.D. N.D. +0.2 N.D.
carbon source pyruvate (C) +0.4 N.D. N.D. +0.2 N.D.
nitrogen source D-Alanine (N) +0.4 N.D. N.D. +0.2 N.D.
nitrogen source nitrogen source nitrite 0.1mM +0.5 N.D. N.D. +0.1 N.D.
stress methylglyoxal 0.008 vol% +0.3 N.D. N.D. +0.4 N.D.
stress Benzethonium chloride 0.0125 mM +0.4 N.D. N.D. +0.2 N.D.
stress Cobalt chloride 0.3125 mM +0.5 N.D. N.D. +0.1 N.D.
denitrifying Nitrate reduction in presence of wild-type Pseudomonas N2-E3; replicate A +0.3 N.D. N.D. +0.4 N.D.
nitrogen source nitrogen source nitrate 20mM +0.1 N.D. N.D. +0.6 N.D.
stress Cisplatin 0.006 mg/ml +0.6 N.D. N.D. +0.1 N.D.
nitrogen source Cytidine (N) +0.3 N.D. N.D. +0.5 N.D.
carbon source L-Arginine (C) +0.2 N.D. N.D. +0.6 N.D.
pH Minimal media pH9 +0.4 N.D. N.D. +0.5 N.D.
stress Fusidic 0.125 mg/ml +0.5 N.D. N.D. +0.8 N.D.
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